Guide to the Human Genome
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Name: TMEM158 Sequence: fasta or formatted (300aa) NCBI GI: 116805334
Description:

Ras-induced senescence 1

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            22.3         67          14
 C cysteine            2.7          8           2
 D aspartate           1.7          5           1
 E glutamate           4.0         12           2
 F phenylalanine       3.0          9           2
 G glycine             8.7         26           2
 H histidine           1.3          4           1
 I isoleucine          2.7          8           2
 K lysine              0.7          2           1
 L leucine            11.7         35           3
 M methionine          1.3          4           1
 N asparagine          2.0          6           1
 P proline            11.0         33           2
 Q glutamine           2.7          8           2
 R arginine            6.3         19           2
 S serine              5.0         15           2
 T threonine           5.0         15           2
 V valine              5.7         17           2
 W tryptophan          2.0          6           1
 Y tyrosine            0.3          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Ras-induced senescence 1 
TAF4                  0.029   TBP-associated factor 4 
LOC100133142          0.024   PREDICTED: similar to zinc finger protein 208 [Homo...
LOC100133142          0.024   PREDICTED: similar to zinc finger protein 208 [Homo...
FAM48B1               0.024   hypothetical protein LOC100130302 
ZSWIM6                0.023   zinc finger, SWIM-type containing 6 
LOC100293036          0.023   PREDICTED: hypothetical protein 
EVX2                  0.023   even-skipped homeobox 2 
AMOT                  0.021   angiomotin isoform 2 
AMOT                  0.021   angiomotin isoform 1 
OLIG1                 0.021   oligodendrocyte transcription factor 1 
HOXA13                0.019   homeobox A13 
FOXD2                 0.019   forkhead box D2 
PRPF40A               0.019   formin binding protein 3 
SHANK1                0.019   SH3 and multiple ankyrin repeat domains 1 
LOC642587             0.019   hypothetical protein LOC642587 
NPTXR                 0.017   neuronal pentraxin receptor 
SDC3                  0.017   syndecan 3 
SFRS15                0.017   splicing factor, arginine/serine-rich 15 isoform 3 ...
SFRS15                0.017   splicing factor, arginine/serine-rich 15 isoform 2 ...
SFRS15                0.017   splicing factor, arginine/serine-rich 15 isoform 1 [...
PRDM6                 0.017   PR domain containing 6 
ZFPM1                 0.017   zinc finger protein, multitype 1 
PCBP4                 0.017   poly(rC) binding protein 4 isoform a 
PCBP4                 0.017   poly(rC) binding protein 4 isoform c 
PCBP4                 0.017   poly(rC) binding protein 4 isoform c 
DEAF1                 0.017   deformed epidermal autoregulatory factor 1 
LOC100294411          0.017   PREDICTED: similar to deformed epidermal autoregula...
NKX6-1                0.017   NK6 transcription factor related, locus 1 
ZBTB4                 0.017   zinc finger and BTB domain containing 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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