LMX1A 35548

Name: LMX1A	Sequence: fasta or formatted (100aa)		NCBI GI: 75677381
Description: LIM homeobox transcription factor 1, alpha isoform c		Referenced in: Homeobox and Related Proteins
Other entries for this name: alt prot [382aa] LIM homeobox transcription factor 1, alpha isoform a alt prot [133aa] LIM homeobox transcription factor 1, alpha isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.0 5 1 C cysteine 1.0 1 1 D aspartate 8.0 8 2 E glutamate 4.0 4 1 F phenylalanine 4.0 4 1 G glycine 7.0 7 1 H histidine 4.0 4 1 I isoleucine 3.0 3 1 K lysine 0.0 0 0 L leucine 11.0 11 2 M methionine 5.0 5 1 N asparagine 4.0 4 1 P proline 11.0 11 2 Q glutamine 7.0 7 2 R arginine 2.0 2 1 S serine 11.0 11 2 T threonine 6.0 6 1 V valine 2.0 2 1 W tryptophan 0.0 0 0 Y tyrosine 5.0 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LIM homeobox transcription factor 1, alpha isoform c... LMX1A 1.000 LIM homeobox transcription factor 1, alpha isoform b... LMX1A 1.000 LIM homeobox transcription factor 1, alpha isoform a... LMX1B 0.508 LIM homeobox transcription factor 1, beta PLEKHA4 0.016 pleckstrin homology domain containing family A memb... PLEKHA4 0.016 pleckstrin homology domain containing family A memb... BTBD12 0.011 BTB (POZ) domain containing 12 PTCH2 0.005 patched 2 LOC100293485 0.005 PREDICTED: hypothetical protein CCDC116 0.005 coiled-coil domain containing 116 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.