Search of human proteins with 4503975

Search of human proteins with 4503975

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4503975 glial cell derived neurotrophic factor isoform 1
preproprotein [Homo sapiens]
         (211 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4503975 glial cell derived neurotrophic factor isoform 1 prep...   432   e-122
gi|40549411 glial cell derived neurotrophic factor isoform 2 pre...   365   e-101
gi|40549413 glial cell derived neurotrophic factor isoform 3 [Ho...   241   3e-64
gi|4758826 neurturin preproprotein [Homo sapiens]                     100   1e-21
gi|16950645 neurotrophic factor artemin isoform 2 [Homo sapiens]       69   4e-12
gi|209954781 neurotrophic factor artemin isoform 1 precursor [Ho...    69   4e-12
gi|209954778 neurotrophic factor artemin isoform 3 precursor [Ho...    69   4e-12
gi|209954776 neurotrophic factor artemin isoform 1 precursor [Ho...    69   4e-12
gi|209977029 neurotrophic factor artemin isoform 3 precursor [Ho...    69   4e-12
gi|4758974 persephin precursor [Homo sapiens]                          68   5e-12
gi|7705308 growth differentiation factor 2 [Homo sapiens]              33   0.14 
gi|4503969 growth differentiation factor 5 preproprotein [Homo s...    32   0.51 
gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans...    30   1.1  
gi|239744415 PREDICTED: similar to unc-93 homolog B1 (C. elegans...    30   1.1  
gi|31542634 filamin A interacting protein 1 [Homo sapiens]             30   2.0  
gi|11560152 zinc finger protein 335 [Homo sapiens]                     29   2.6  
gi|8922112 carbohydrate sulfotransferase 12 [Homo sapiens]             29   2.6  
gi|22218341 matrix metalloproteinase 21 preproprotein [Homo sapi...    29   2.6  
gi|22027554 voltage-dependent calcium channel gamma-6 subunit is...    29   2.6  
gi|22027560 voltage-dependent calcium channel gamma-6 subunit is...    29   2.6  
gi|22027557 voltage-dependent calcium channel gamma-6 subunit is...    29   2.6  
gi|24234690 meiotic recombination 11 homolog A isoform 2 [Homo s...    29   3.3  
gi|5031923 meiotic recombination 11 homolog A isoform 1 [Homo sa...    29   3.3  
gi|20336477 B-cell CLL/lymphoma 7C [Homo sapiens]                      29   3.3  
gi|41152076 steroid-sensitive protein 1 [Homo sapiens]                 29   3.3  
gi|41152074 steroid-sensitive protein 1 [Homo sapiens]                 29   3.3  
gi|157266269 GATA like protein-1 [Homo sapiens]                        29   3.3  
gi|68160947 secretogranin II precursor [Homo sapiens]                  28   5.7  
gi|122937301 G protein-coupled receptor 108 isoform 1 [Homo sapi...    28   5.7  
gi|38569471 MUF1 protein [Homo sapiens]                                28   5.7  

>gi|4503975 glial cell derived neurotrophic factor isoform 1
           preproprotein [Homo sapiens]
          Length = 211

 Score =  432 bits (1112), Expect = e-122
 Identities = 211/211 (100%), Positives = 211/211 (100%)

Query: 1   MKLWDVVAVCLVLLHTASAFPLPAGKRPPEAPAEDRSLGRRRAPFALSSDSNMPEDYPDQ 60
           MKLWDVVAVCLVLLHTASAFPLPAGKRPPEAPAEDRSLGRRRAPFALSSDSNMPEDYPDQ
Sbjct: 1   MKLWDVVAVCLVLLHTASAFPLPAGKRPPEAPAEDRSLGRRRAPFALSSDSNMPEDYPDQ 60

Query: 61  FDDVMDFIQATIKRLKRSPDKQMAVLPRRERNRQAAAANPENSRGKGRRGQRGKNRGCVL 120
           FDDVMDFIQATIKRLKRSPDKQMAVLPRRERNRQAAAANPENSRGKGRRGQRGKNRGCVL
Sbjct: 61  FDDVMDFIQATIKRLKRSPDKQMAVLPRRERNRQAAAANPENSRGKGRRGQRGKNRGCVL 120

Query: 121 TAIHLNVTDLGLGYETKEELIFRYCSGSCDAAETTYDKILKNLSRNRRLVSDKVGQACCR 180
           TAIHLNVTDLGLGYETKEELIFRYCSGSCDAAETTYDKILKNLSRNRRLVSDKVGQACCR
Sbjct: 121 TAIHLNVTDLGLGYETKEELIFRYCSGSCDAAETTYDKILKNLSRNRRLVSDKVGQACCR 180

Query: 181 PIAFDDDLSFLDDNLVYHILRKHSAKRCGCI 211
           PIAFDDDLSFLDDNLVYHILRKHSAKRCGCI
Sbjct: 181 PIAFDDDLSFLDDNLVYHILRKHSAKRCGCI 211


>gi|40549411 glial cell derived neurotrophic factor isoform 2
           precursor [Homo sapiens]
          Length = 185

 Score =  365 bits (938), Expect = e-101
 Identities = 184/211 (87%), Positives = 185/211 (87%), Gaps = 26/211 (12%)

Query: 1   MKLWDVVAVCLVLLHTASAFPLPAGKRPPEAPAEDRSLGRRRAPFALSSDSNMPEDYPDQ 60
           MKLWDVVAVCLVLLHTASAFPLPA                          +NMPEDYPDQ
Sbjct: 1   MKLWDVVAVCLVLLHTASAFPLPA--------------------------ANMPEDYPDQ 34

Query: 61  FDDVMDFIQATIKRLKRSPDKQMAVLPRRERNRQAAAANPENSRGKGRRGQRGKNRGCVL 120
           FDDVMDFIQATIKRLKRSPDKQMAVLPRRERNRQAAAANPENSRGKGRRGQRGKNRGCVL
Sbjct: 35  FDDVMDFIQATIKRLKRSPDKQMAVLPRRERNRQAAAANPENSRGKGRRGQRGKNRGCVL 94

Query: 121 TAIHLNVTDLGLGYETKEELIFRYCSGSCDAAETTYDKILKNLSRNRRLVSDKVGQACCR 180
           TAIHLNVTDLGLGYETKEELIFRYCSGSCDAAETTYDKILKNLSRNRRLVSDKVGQACCR
Sbjct: 95  TAIHLNVTDLGLGYETKEELIFRYCSGSCDAAETTYDKILKNLSRNRRLVSDKVGQACCR 154

Query: 181 PIAFDDDLSFLDDNLVYHILRKHSAKRCGCI 211
           PIAFDDDLSFLDDNLVYHILRKHSAKRCGCI
Sbjct: 155 PIAFDDDLSFLDDNLVYHILRKHSAKRCGCI 185


>gi|40549413 glial cell derived neurotrophic factor isoform 3 [Homo
           sapiens]
          Length = 133

 Score =  241 bits (615), Expect = 3e-64
 Identities = 115/115 (100%), Positives = 115/115 (100%)

Query: 97  AANPENSRGKGRRGQRGKNRGCVLTAIHLNVTDLGLGYETKEELIFRYCSGSCDAAETTY 156
           AANPENSRGKGRRGQRGKNRGCVLTAIHLNVTDLGLGYETKEELIFRYCSGSCDAAETTY
Sbjct: 19  AANPENSRGKGRRGQRGKNRGCVLTAIHLNVTDLGLGYETKEELIFRYCSGSCDAAETTY 78

Query: 157 DKILKNLSRNRRLVSDKVGQACCRPIAFDDDLSFLDDNLVYHILRKHSAKRCGCI 211
           DKILKNLSRNRRLVSDKVGQACCRPIAFDDDLSFLDDNLVYHILRKHSAKRCGCI
Sbjct: 79  DKILKNLSRNRRLVSDKVGQACCRPIAFDDDLSFLDDNLVYHILRKHSAKRCGCI 133


>gi|4758826 neurturin preproprotein [Homo sapiens]
          Length = 197

 Score =  100 bits (248), Expect = 1e-21
 Identities = 48/115 (41%), Positives = 72/115 (62%), Gaps = 5/115 (4%)

Query: 98  ANPENSRGKGRRGQRGKNRGCVLTAIHLNVTDLGLGYETKEELIFRYCSGSCDAAETTYD 157
           A P   R + R G R     C L  + + V++LGLGY + E ++FRYC+G+C+AA   YD
Sbjct: 87  AGPRRRRARARLGARP----CGLRELEVRVSELGLGYASDETVLFRYCAGACEAAARVYD 142

Query: 158 KILKNLSRNRRLVSDKV-GQACCRPIAFDDDLSFLDDNLVYHILRKHSAKRCGCI 211
             L+ L + RRL  ++V  Q CCRP A++D++SFLD +  YH + + SA+ C C+
Sbjct: 143 LGLRRLRQRRRLRRERVRAQPCCRPTAYEDEVSFLDAHSRYHTVHELSARECACV 197


>gi|16950645 neurotrophic factor artemin isoform 2 [Homo sapiens]
          Length = 237

 Score = 68.6 bits (166), Expect = 4e-12
 Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 13/137 (9%)

Query: 79  PDKQMAVLPRRERNRQAAAANPENSRGKGRRGQRGKNRGCVLTAIHLNVTDLGLGYETKE 138
           P    + LPR  R  +A         G G R +    RGC L +  + V  LGLG+ + E
Sbjct: 109 PPAPPSALPRGGRAARAG--------GPGSRARAAGARGCRLRSQLVPVRALGLGHRSDE 160

Query: 139 ELIFRYCSGSCDAAETTYDKILKNLSRNRRL----VSDKVGQACCRPIAFDDDLSFLDDN 194
            + FR+CSGSC  A + +D  L +L     L     S  V Q CCRP  + + +SF+D N
Sbjct: 161 LVRFRFCSGSCRRARSPHDLSLASLLGAGALRPPPGSRPVSQPCCRPTRY-EAVSFMDVN 219

Query: 195 LVYHILRKHSAKRCGCI 211
             +  + + SA  CGC+
Sbjct: 220 STWRTVDRLSATACGCL 236


>gi|209954781 neurotrophic factor artemin isoform 1 precursor [Homo
           sapiens]
          Length = 220

 Score = 68.6 bits (166), Expect = 4e-12
 Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 13/137 (9%)

Query: 79  PDKQMAVLPRRERNRQAAAANPENSRGKGRRGQRGKNRGCVLTAIHLNVTDLGLGYETKE 138
           P    + LPR  R  +A         G G R +    RGC L +  + V  LGLG+ + E
Sbjct: 92  PPAPPSALPRGGRAARAG--------GPGSRARAAGARGCRLRSQLVPVRALGLGHRSDE 143

Query: 139 ELIFRYCSGSCDAAETTYDKILKNLSRNRRL----VSDKVGQACCRPIAFDDDLSFLDDN 194
            + FR+CSGSC  A + +D  L +L     L     S  V Q CCRP  + + +SF+D N
Sbjct: 144 LVRFRFCSGSCRRARSPHDLSLASLLGAGALRPPPGSRPVSQPCCRPTRY-EAVSFMDVN 202

Query: 195 LVYHILRKHSAKRCGCI 211
             +  + + SA  CGC+
Sbjct: 203 STWRTVDRLSATACGCL 219


>gi|209954778 neurotrophic factor artemin isoform 3 precursor [Homo
           sapiens]
          Length = 228

 Score = 68.6 bits (166), Expect = 4e-12
 Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 13/137 (9%)

Query: 79  PDKQMAVLPRRERNRQAAAANPENSRGKGRRGQRGKNRGCVLTAIHLNVTDLGLGYETKE 138
           P    + LPR  R  +A         G G R +    RGC L +  + V  LGLG+ + E
Sbjct: 100 PPAPPSALPRGGRAARAG--------GPGSRARAAGARGCRLRSQLVPVRALGLGHRSDE 151

Query: 139 ELIFRYCSGSCDAAETTYDKILKNLSRNRRL----VSDKVGQACCRPIAFDDDLSFLDDN 194
            + FR+CSGSC  A + +D  L +L     L     S  V Q CCRP  + + +SF+D N
Sbjct: 152 LVRFRFCSGSCRRARSPHDLSLASLLGAGALRPPPGSRPVSQPCCRPTRY-EAVSFMDVN 210

Query: 195 LVYHILRKHSAKRCGCI 211
             +  + + SA  CGC+
Sbjct: 211 STWRTVDRLSATACGCL 227


>gi|209954776 neurotrophic factor artemin isoform 1 precursor [Homo
           sapiens]
          Length = 220

 Score = 68.6 bits (166), Expect = 4e-12
 Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 13/137 (9%)

Query: 79  PDKQMAVLPRRERNRQAAAANPENSRGKGRRGQRGKNRGCVLTAIHLNVTDLGLGYETKE 138
           P    + LPR  R  +A         G G R +    RGC L +  + V  LGLG+ + E
Sbjct: 92  PPAPPSALPRGGRAARAG--------GPGSRARAAGARGCRLRSQLVPVRALGLGHRSDE 143

Query: 139 ELIFRYCSGSCDAAETTYDKILKNLSRNRRL----VSDKVGQACCRPIAFDDDLSFLDDN 194
            + FR+CSGSC  A + +D  L +L     L     S  V Q CCRP  + + +SF+D N
Sbjct: 144 LVRFRFCSGSCRRARSPHDLSLASLLGAGALRPPPGSRPVSQPCCRPTRY-EAVSFMDVN 202

Query: 195 LVYHILRKHSAKRCGCI 211
             +  + + SA  CGC+
Sbjct: 203 STWRTVDRLSATACGCL 219


>gi|209977029 neurotrophic factor artemin isoform 3 precursor [Homo
           sapiens]
          Length = 228

 Score = 68.6 bits (166), Expect = 4e-12
 Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 13/137 (9%)

Query: 79  PDKQMAVLPRRERNRQAAAANPENSRGKGRRGQRGKNRGCVLTAIHLNVTDLGLGYETKE 138
           P    + LPR  R  +A         G G R +    RGC L +  + V  LGLG+ + E
Sbjct: 100 PPAPPSALPRGGRAARAG--------GPGSRARAAGARGCRLRSQLVPVRALGLGHRSDE 151

Query: 139 ELIFRYCSGSCDAAETTYDKILKNLSRNRRL----VSDKVGQACCRPIAFDDDLSFLDDN 194
            + FR+CSGSC  A + +D  L +L     L     S  V Q CCRP  + + +SF+D N
Sbjct: 152 LVRFRFCSGSCRRARSPHDLSLASLLGAGALRPPPGSRPVSQPCCRPTRY-EAVSFMDVN 210

Query: 195 LVYHILRKHSAKRCGCI 211
             +  + + SA  CGC+
Sbjct: 211 STWRTVDRLSATACGCL 227


>gi|4758974 persephin precursor [Homo sapiens]
          Length = 156

 Score = 68.2 bits (165), Expect = 5e-12
 Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 6/103 (5%)

Query: 109 RGQRGKNRGCVLTAIHLNVTDLGLGYETKEELIFRYCSGSCD-AAETTYDKILKNLSRNR 167
           R +R  +  C L ++ L+V +LGLGY ++E++IFRYC+GSC   A T +   L  L    
Sbjct: 57  RLRRALSGPCQLWSLTLSVAELGLGYASEEKVIFRYCAGSCPRGARTQHGLALARLQGQG 116

Query: 168 RLVSDKVGQACCRPIAFDDDLSFLDDNLVYHILRKHSAKRCGC 210
           R      G  CCRP  +  D++FLDD   +  L + SA  CGC
Sbjct: 117 R----AHGGPCCRPTRY-TDVAFLDDRHRWQRLPQLSAAACGC 154


>gi|7705308 growth differentiation factor 2 [Homo sapiens]
          Length = 429

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 37/159 (23%), Positives = 56/159 (35%), Gaps = 28/159 (17%)

Query: 69  QATIKRLKRSPDKQMAVLPRRERNRQAAAANPENSRGKGRRGQRGKNRGCVLTAIHLNVT 128
           ++ +K+L +    +       E      AA    +R   R+   G    C  T++ +N  
Sbjct: 281 ESVLKKLSKDGSTEAGESSHEEDTDGHVAAGSTLAR---RKRSAGAGSHCQKTSLRVNFE 337

Query: 129 DLGLG--------YETKEELIFRYCSGSC-----DAAETTYDKILKNLSRNRRLVSDKVG 175
           D+G          YE  E      C G C     D    T   I++ L   +     KVG
Sbjct: 338 DIGWDSWIIAPKEYEAYE------CKGGCFFPLADDVTPTKHAIVQTLVHLK--FPTKVG 389

Query: 176 QACCRPIAFDDDLSFLDDNLVYHILRKH----SAKRCGC 210
           +ACC P           D++    L+ H    S   CGC
Sbjct: 390 KACCVPTKLSPISVLYKDDMGVPTLKYHYEGMSVAECGC 428


>gi|4503969 growth differentiation factor 5 preproprotein [Homo
           sapiens]
          Length = 501

 Score = 31.6 bits (70), Expect = 0.51
 Identities = 30/132 (22%), Positives = 52/132 (39%), Gaps = 17/132 (12%)

Query: 89  RERNRQAAAANPENSRGKGRRGQRGKNRGCVLTAIHLNVTDLGLGYETKEELIFR--YCS 146
           + R R+A  A  +     G+R  +     C   A+H+N  D+G        L +   +C 
Sbjct: 376 QRRKRRAPLATRQ-----GKRPSKNLKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCE 430

Query: 147 GSCD-----AAETTYDKILKNLSRNRRLVSDKVGQACCRPIAFDD-DLSFLD--DNLVYH 198
           G C+       E T   +++ L  +  +  +     CC P       + F+D  +N+VY 
Sbjct: 431 GLCEFPLRSHLEPTNHAVIQTLMNS--MDPESTPPTCCVPTRLSPISILFIDSANNVVYK 488

Query: 199 ILRKHSAKRCGC 210
                  + CGC
Sbjct: 489 QYEDMVVESCGC 500


>gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans)
           [Homo sapiens]
          Length = 529

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 3/38 (7%)

Query: 23  PAGKRPPEAPAEDRSLGRRRAPFALSSDSNMPEDYPDQ 60
           PAG RP   PA    LGRR  P+  +   + PE++P Q
Sbjct: 186 PAGPRPGPEPA---GLGRRPCPYEQAQRGDGPEEHPLQ 220


>gi|239744415 PREDICTED: similar to unc-93 homolog B1 (C. elegans)
           [Homo sapiens]
          Length = 503

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 3/38 (7%)

Query: 23  PAGKRPPEAPAEDRSLGRRRAPFALSSDSNMPEDYPDQ 60
           PAG RP   PA    LGRR  P+  +   + PE++P Q
Sbjct: 160 PAGPRPGPEPA---GLGRRPCPYEQAQRGDGPEEHPLQ 194


>gi|31542634 filamin A interacting protein 1 [Homo sapiens]
          Length = 1213

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 13/51 (25%), Positives = 29/51 (56%)

Query: 41  RRAPFALSSDSNMPEDYPDQFDDVMDFIQATIKRLKRSPDKQMAVLPRRER 91
           RR  + L ++ +   DY ++ DD  + ++   +RLK+  +++ A   R+E+
Sbjct: 177 RRTVYELENEKHKHTDYMNKSDDFTNLLEQERERLKKLLEQEKAYQARKEK 227


>gi|11560152 zinc finger protein 335 [Homo sapiens]
          Length = 1342

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 15  HTASAFPLPAGKRPPEAPAEDRSLGRRRAPFALSSDS 51
           H+A+  P P+   PPE P E  +     AP  L SD+
Sbjct: 736 HSAAPGPPPSSPGPPEIPPEATTFQSSEAPSLLCSDT 772


>gi|8922112 carbohydrate sulfotransferase 12 [Homo sapiens]
          Length = 414

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 21/137 (15%)

Query: 4   WDVVAVCLVLLHTASAFPLPAGKRPPEAPAEDRSLGRRRAPFALSSDSNMPEDYPDQFDD 63
           WD        LHT+ + P      P   P  DR          L++DS++     D+F D
Sbjct: 26  WDSAGAAHFYLHTSFSRPHTGPPLPTPGPDRDRE---------LTADSDV-----DEFLD 71

Query: 64  VMDFIQATIKR--LKRSPDKQMAVLPRRERNRQAAAANPENSRGKGRRGQRGKNRGCVLT 121
              F+ A +K+  L R   +Q       E + +    +P ++R    +G++   R  VL 
Sbjct: 72  --KFLSAGVKQSDLPRKETEQPPAPGSMEESVRGYDWSPRDARRSPDQGRQQAERRSVLR 129

Query: 122 AIHLNVTDLGLGYETKE 138
               N +   L + TKE
Sbjct: 130 GFCANSS---LAFPTKE 143


>gi|22218341 matrix metalloproteinase 21 preproprotein [Homo
           sapiens]
          Length = 569

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 16/39 (41%), Positives = 17/39 (43%)

Query: 21  PLPAGKRPPEAPAEDRSLGRRRAPFALSSDSNMPEDYPD 59
           P  A   PP  P   RS    RAP +LS     P  YPD
Sbjct: 126 PPSAPPSPPGPPPRARSRRSPRAPLSLSRRGWQPRGYPD 164


>gi|22027554 voltage-dependent calcium channel gamma-6 subunit
           isoform a [Homo sapiens]
          Length = 260

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 7/71 (9%)

Query: 89  RERNRQAAAANPENSRGKGRRGQRGKNRGCV-----LTAIHLNVTDLGLGYETKEELIFR 143
           +E NR+  AA    + G+GR G   +  G V     L A+   +  L +G E   EL   
Sbjct: 9   QEENRRRGAAGRRRAHGQGRSGLTPEREGKVKLALLLAAVGATLAVLSVGTEFWVELNTY 68

Query: 144 YCSGS--CDAA 152
             +GS  C+AA
Sbjct: 69  KANGSAVCEAA 79


>gi|22027560 voltage-dependent calcium channel gamma-6 subunit
           isoform c [Homo sapiens]
          Length = 189

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 7/71 (9%)

Query: 89  RERNRQAAAANPENSRGKGRRGQRGKNRGCV-----LTAIHLNVTDLGLGYETKEELIFR 143
           +E NR+  AA    + G+GR G   +  G V     L A+   +  L +G E   EL   
Sbjct: 9   QEENRRRGAAGRRRAHGQGRSGLTPEREGKVKLALLLAAVGATLAVLSVGTEFWVELNTY 68

Query: 144 YCSGS--CDAA 152
             +GS  C+AA
Sbjct: 69  KANGSAVCEAA 79


>gi|22027557 voltage-dependent calcium channel gamma-6 subunit
           isoform b [Homo sapiens]
          Length = 214

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 7/71 (9%)

Query: 89  RERNRQAAAANPENSRGKGRRGQRGKNRGCV-----LTAIHLNVTDLGLGYETKEELIFR 143
           +E NR+  AA    + G+GR G   +  G V     L A+   +  L +G E   EL   
Sbjct: 9   QEENRRRGAAGRRRAHGQGRSGLTPEREGKVKLALLLAAVGATLAVLSVGTEFWVELNTY 68

Query: 144 YCSGS--CDAA 152
             +GS  C+AA
Sbjct: 69  KANGSAVCEAA 79


>gi|24234690 meiotic recombination 11 homolog A isoform 2 [Homo
           sapiens]
          Length = 680

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 12/21 (57%), Positives = 15/21 (71%)

Query: 95  AAAANPENSRGKGRRGQRGKN 115
           +AA N    RG+GRRG RG+N
Sbjct: 563 SAATNKGRGRGRGRRGGRGQN 583


>gi|5031923 meiotic recombination 11 homolog A isoform 1 [Homo
           sapiens]
          Length = 708

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 12/21 (57%), Positives = 15/21 (71%)

Query: 95  AAAANPENSRGKGRRGQRGKN 115
           +AA N    RG+GRRG RG+N
Sbjct: 563 SAATNKGRGRGRGRRGGRGQN 583


>gi|20336477 B-cell CLL/lymphoma 7C [Homo sapiens]
          Length = 217

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 81  KQMAVLPRRERNRQAAAANPENSRGKGRRGQRGKNRG 117
           K + V+  +E  R+ A    E SRG+ RRG+    RG
Sbjct: 47  KWVPVVDPQEEERRRAGGGAERSRGRERRGRGASPRG 83


>gi|41152076 steroid-sensitive protein 1 [Homo sapiens]
          Length = 950

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 5/81 (6%)

Query: 21  PLPAGKRPPEAPAEDRSLGRRRAPFALSSDSNMPEDYPDQFDDVMDFIQATIKRLKRSPD 80
           P PA ++PP+  A+D+ L      +    D + P     Q +D +      +K+ K S  
Sbjct: 485 PKPAKEKPPKKKAQDKILSNE---YEEKYDLSRPT--ASQLEDELQVGNVPLKKAKESKK 539

Query: 81  KQMAVLPRRERNRQAAAANPE 101
            +    P +E+ ++    N +
Sbjct: 540 HEKLEKPEKEKKKKMKNENAD 560


>gi|41152074 steroid-sensitive protein 1 [Homo sapiens]
          Length = 950

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 5/81 (6%)

Query: 21  PLPAGKRPPEAPAEDRSLGRRRAPFALSSDSNMPEDYPDQFDDVMDFIQATIKRLKRSPD 80
           P PA ++PP+  A+D+ L      +    D + P     Q +D +      +K+ K S  
Sbjct: 485 PKPAKEKPPKKKAQDKILSNE---YEEKYDLSRPT--ASQLEDELQVGNVPLKKAKESKK 539

Query: 81  KQMAVLPRRERNRQAAAANPE 101
            +    P +E+ ++    N +
Sbjct: 540 HEKLEKPEKEKKKKMKNENAD 560


>gi|157266269 GATA like protein-1 [Homo sapiens]
          Length = 271

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 32 PAEDRSLGRRRAPFALSSDSNMPEDYPDQFDDVMDFIQATIKRLKRSPDKQMAVL 86
          PA+ RS  R+R P AL   S  P     +    + F+Q T++RL +SP +   VL
Sbjct: 26 PAKPRSHPRKRDPTALLPRSLWPAC--QESVTALCFLQETVERLGQSPAQDTPVL 78


>gi|68160947 secretogranin II precursor [Homo sapiens]
          Length = 617

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 30  EAPAEDRSLGRRRAPFALSSDSNMPEDYPDQFD 62
           +A  E +S  +   P+AL+S+ N P D  D ++
Sbjct: 120 QAENEPQSAPKENKPYALNSEKNFPMDMSDDYE 152


>gi|122937301 G protein-coupled receptor 108 isoform 1 [Homo
           sapiens]
          Length = 543

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 81  KQMAVLPRRERNRQAAAANPENSRGKGRRGQRGKNRGCVLTAIHLNVT-----DLGLGYE 135
           K  A +PR+      +AA+   S     +G  GK++  VL   HLN +      + +G +
Sbjct: 155 KPQATVPRKVDGGGTSAASKPKSTPAVIQGPSGKDKDLVLGLSHLNNSYNFSFHVVIGSQ 214

Query: 136 TKE---ELIFRYCSGSCDAAETTYD 157
            +E    L F  C+ S    E  +D
Sbjct: 215 AEEGQYSLNFHNCNNSVPGKEHPFD 239


>gi|38569471 MUF1 protein [Homo sapiens]
          Length = 812

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 19/86 (22%)

Query: 17  ASAFPLPAGKRPPEAPAEDRSLGRRRAPFALSSDSNMPEDYPDQFDDVMDFIQATIKRLK 76
           A++   P  KR P APA   S     + +  +  S+ P+  P             +KR K
Sbjct: 346 ATSHEAPGTKRSPSAPAATSSASSSTSSYKRAPASSAPQPKP-------------LKRFK 392

Query: 77  RSPDKQMAVLPRRERNRQAAAANPEN 102
           R+  K+ A      R RQ   A  E+
Sbjct: 393 RAAGKKGA------RTRQGPGAESED 412


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.137    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,607,662
Number of Sequences: 37866
Number of extensions: 390700
Number of successful extensions: 1768
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 1728
Number of HSP's gapped (non-prelim): 66
length of query: 211
length of database: 18,247,518
effective HSP length: 98
effective length of query: 113
effective length of database: 14,536,650
effective search space: 1642641450
effective search space used: 1642641450
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.