GDNF 27520

Name: GDNF	Sequence: fasta or formatted (133aa)		NCBI GI: 40549413
Description: glial cell derived neurotrophic factor isoform 3		Referenced in: Neurons Receptor Tyrosine Kinases
Other entries for this name: alt prot [185aa] glial cell derived neurotrophic factor isoform 2 precursor alt prot [211aa] glial cell derived neurotrophic factor isoform 1 preproprotein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 10 2 C cysteine 6.8 9 2 D aspartate 6.8 9 3 E glutamate 3.8 5 2 F phenylalanine 2.3 3 1 G glycine 9.8 13 1 H histidine 3.0 4 1 I isoleucine 4.5 6 1 K lysine 6.0 8 1 L leucine 10.5 14 1 M methionine 0.8 1 1 N asparagine 5.3 7 1 P proline 3.8 5 1 Q glutamine 1.5 2 1 R arginine 11.3 15 2 S serine 5.3 7 1 T threonine 3.8 5 2 V valine 4.5 6 1 W tryptophan 0.0 0 0 Y tyrosine 3.0 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 glial cell derived neurotrophic factor isoform 3 [Ho... GDNF 0.844 glial cell derived neurotrophic factor isoform 2 pre... GDNF 0.844 glial cell derived neurotrophic factor isoform 1 prep... NRTN 0.293 neurturin preproprotein ARTN 0.176 neurotrophic factor artemin isoform 2 ARTN 0.176 neurotrophic factor artemin isoform 1 precursor [Ho... ARTN 0.176 neurotrophic factor artemin isoform 3 precursor [Ho... ARTN 0.176 neurotrophic factor artemin isoform 1 precursor [Ho... ARTN 0.176 neurotrophic factor artemin isoform 3 precursor [Ho... PSPN 0.168 persephin precursor GDF2 0.027 growth differentiation factor 2 GDF5 0.023 growth differentiation factor 5 preproprotein BMP3 0.016 bone morphogenetic protein 3 preproprotein FBN3 0.012 fibrillin 3 precursor MRE11A 0.008 meiotic recombination 11 homolog A isoform 2 MRE11A 0.008 meiotic recombination 11 homolog A isoform 1 C11orf17 0.008 chromosome 11 open reading frame 17 C11orf17 0.008 chromosome 11 open reading frame 17 CROCC 0.004 ciliary rootlet coiled-coil Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.