GDNF 27519

Name: GDNF	Sequence: fasta or formatted (185aa)		NCBI GI: 40549411
Description: glial cell derived neurotrophic factor isoform 2 precursor		Referenced in: Neurons Receptor Tyrosine Kinases
Other entries for this name: alt prot [133aa] glial cell derived neurotrophic factor isoform 3 alt prot [211aa] glial cell derived neurotrophic factor isoform 1 preproprotein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.2 17 4 C cysteine 4.3 8 2 D aspartate 8.6 16 3 E glutamate 3.8 7 2 F phenylalanine 3.2 6 1 G glycine 5.4 10 1 H histidine 2.2 4 1 I isoleucine 4.3 8 1 K lysine 6.5 12 1 L leucine 10.3 19 2 M methionine 2.2 4 1 N asparagine 4.9 9 1 P proline 4.3 8 1 Q glutamine 3.2 6 1 R arginine 9.7 18 2 S serine 4.9 9 1 T threonine 3.8 7 2 V valine 5.9 11 2 W tryptophan 0.5 1 1 Y tyrosine 2.7 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 glial cell derived neurotrophic factor isoform 2 pre... GDNF 0.955 glial cell derived neurotrophic factor isoform 1 prep... GDNF 0.607 glial cell derived neurotrophic factor isoform 3 [Ho... NRTN 0.211 neurturin preproprotein ARTN 0.124 neurotrophic factor artemin isoform 2 ARTN 0.124 neurotrophic factor artemin isoform 1 precursor [Ho... ARTN 0.124 neurotrophic factor artemin isoform 3 precursor [Ho... ARTN 0.124 neurotrophic factor artemin isoform 1 precursor [Ho... ARTN 0.124 neurotrophic factor artemin isoform 3 precursor [Ho... PSPN 0.121 persephin precursor GDF2 0.022 growth differentiation factor 2 GDF5 0.020 growth differentiation factor 5 preproprotein CACNG6 0.011 voltage-dependent calcium channel gamma-6 subunit is... CACNG6 0.011 voltage-dependent calcium channel gamma-6 subunit is... CACNG6 0.011 voltage-dependent calcium channel gamma-6 subunit is... MRE11A 0.011 meiotic recombination 11 homolog A isoform 2 MRE11A 0.011 meiotic recombination 11 homolog A isoform 1 BCL7C 0.011 B-cell CLL/lymphoma 7C CHST12 0.008 carbohydrate sulfotransferase 12 GPR108 0.008 G protein-coupled receptor 108 isoform 1 LOC643783 0.008 PREDICTED: hypothetical protein LOC643783 0.008 PREDICTED: hypothetical protein LOC643783 0.008 PREDICTED: hypothetical protein FBN3 0.008 fibrillin 3 precursor USH1C 0.006 harmonin isoform b3 USH1C 0.006 harmonin isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.