GDNF 28712

Name: GDNF	Sequence: fasta or formatted (211aa)		NCBI GI: 4503975
Description: glial cell derived neurotrophic factor isoform 1 preproprotein		Referenced in: Neurons Receptor Tyrosine Kinases
Other entries for this name: alt prot [185aa] glial cell derived neurotrophic factor isoform 2 precursor alt prot [133aa] glial cell derived neurotrophic factor isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.5 20 4 C cysteine 3.8 8 2 D aspartate 8.5 18 3 E glutamate 4.3 9 2 F phenylalanine 3.3 7 1 G glycine 5.7 12 1 H histidine 1.9 4 1 I isoleucine 3.8 8 1 K lysine 6.2 13 1 L leucine 10.0 21 2 M methionine 1.9 4 1 N asparagine 4.3 9 1 P proline 5.7 12 2 Q glutamine 2.8 6 1 R arginine 10.9 23 3 S serine 6.2 13 2 T threonine 3.3 7 2 V valine 5.2 11 2 W tryptophan 0.5 1 1 Y tyrosine 2.4 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 glial cell derived neurotrophic factor isoform 1 prep... GDNF 0.835 glial cell derived neurotrophic factor isoform 2 pre... GDNF 0.531 glial cell derived neurotrophic factor isoform 3 [Ho... NRTN 0.184 neurturin preproprotein ARTN 0.108 neurotrophic factor artemin isoform 2 ARTN 0.108 neurotrophic factor artemin isoform 1 precursor [Ho... ARTN 0.108 neurotrophic factor artemin isoform 3 precursor [Ho... ARTN 0.108 neurotrophic factor artemin isoform 1 precursor [Ho... ARTN 0.108 neurotrophic factor artemin isoform 3 precursor [Ho... PSPN 0.106 persephin precursor GDF2 0.020 growth differentiation factor 2 GDF5 0.017 growth differentiation factor 5 preproprotein LOC729196 0.012 PREDICTED: similar to unc-93 homolog B1 (C. elegans... LOC729196 0.012 PREDICTED: similar to unc-93 homolog B1 (C. elegans... FILIP1 0.012 filamin A interacting protein 1 ZNF335 0.010 zinc finger protein 335 CHST12 0.010 carbohydrate sulfotransferase 12 MMP21 0.010 matrix metalloproteinase 21 preproprotein CACNG6 0.010 voltage-dependent calcium channel gamma-6 subunit is... CACNG6 0.010 voltage-dependent calcium channel gamma-6 subunit is... CACNG6 0.010 voltage-dependent calcium channel gamma-6 subunit is... MRE11A 0.010 meiotic recombination 11 homolog A isoform 2 MRE11A 0.010 meiotic recombination 11 homolog A isoform 1 BCL7C 0.010 B-cell CLL/lymphoma 7C CCDC80 0.010 steroid-sensitive protein 1 CCDC80 0.010 steroid-sensitive protein 1 GLP-1 0.010 GATA like protein-1 SCG2 0.007 secretogranin II precursor GPR108 0.007 G protein-coupled receptor 108 isoform 1 LRRC41 0.007 MUF1 protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.