Guide to the Human Genome
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Name: ZNF335 Sequence: fasta or formatted (1342aa) NCBI GI: 11560152
Description:

zinc finger protein 335

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6        129           7
 C cysteine            2.6         35           1
 D aspartate           5.0         67           4
 E glutamate           7.2         96           3
 F phenylalanine       2.7         36           2
 G glycine             7.0         94           3
 H histidine           4.2         56           2
 I isoleucine          3.0         40           2
 K lysine              4.3         58           2
 L leucine             7.2         96           3
 M methionine          1.6         22           2
 N asparagine          1.3         18           1
 P proline             9.2        123           3
 Q glutamine           6.2         83           2
 R arginine            5.4         73           3
 S serine             10.4        139           4
 T threonine           5.7         77           2
 V valine              5.1         69           4
 W tryptophan          0.4          5           1
 Y tyrosine            1.9         26           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 335 
ZNF184                0.045   zinc finger protein 184 
LOC100292052          0.045   PREDICTED: similar to hCG1773661 
LOC100287226          0.045   PREDICTED: similar to hCG1773661 
LOC100287226          0.045   PREDICTED: hypothetical protein XP_002343677 
ZNF726                0.044   PREDICTED: zinc finger protein 726 
ZNF726                0.044   PREDICTED: zinc finger protein 726 
ZNF726                0.044   PREDICTED: zinc finger protein 726 
ZNF226                0.044   zinc finger protein 226 isoform a 
ZNF226                0.044   zinc finger protein 226 isoform a 
ZNF425                0.044   zinc finger protein 425 
ZNF568                0.044   zinc finger protein 568 
ZNF510                0.044   zinc finger protein 510 
ZNF836                0.043   zinc finger protein 836 
ZNF43                 0.043   zinc finger protein 43 
ZNF221                0.043   zinc finger protein 221 
ZNF717                0.042   zinc finger protein 717 
ZNF782                0.042   zinc finger protein 782 
ZNF234                0.042   zinc finger protein 234 
ZNF234                0.042   zinc finger protein 234 
ZNF254                0.042   zinc finger protein 254 
ZNF708                0.042   zinc finger protein 708 
ZNF28                 0.042   zinc finger protein 28 
LOC388559             0.042   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.042   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.042   PREDICTED: hypothetical protein LOC388559 
ZNF91                 0.042   zinc finger protein 91 
ZNF419                0.042   zinc finger protein 419 isoform 7 
ZNF419                0.042   zinc finger protein 419 isoform 6 
ZNF419                0.042   zinc finger protein 419 isoform 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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