Guide to the Human Genome
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Name: EIF1AX Sequence: fasta or formatted (144aa) NCBI GI: 4503499
Description:

X-linked eukaryotic translation initiation factor 1A

Referenced in:

Gene Families
Small RNAs in RNA Processing
Translation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9          7           1
 C cysteine            1.4          2           1
 D aspartate          13.2         19           3
 E glutamate           9.0         13           1
 F phenylalanine       2.8          4           1
 G glycine             9.7         14           2
 H histidine           1.4          2           1
 I isoleucine          7.6         11           2
 K lysine             11.1         16           2
 L leucine             6.9         10           1
 M methionine          2.1          3           1
 N asparagine          6.2          9           1
 P proline             2.1          3           1
 Q glutamine           2.8          4           1
 R arginine            6.9         10           3
 S serine              2.1          3           1
 T threonine           2.1          3           1
 V valine              4.2          6           1
 W tryptophan          0.7          1           1
 Y tyrosine            2.8          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   X-linked eukaryotic translation initiation factor 1A ... 
EIF1AY                0.996   eukaryotic translation initiation factor 1A, Y chrom...
EIF1AD                0.062   eukaryotic translation initiation factor 1A domain c...
RPGR                  0.018   retinitis pigmentosa GTPase regulator isoform C [Hom...
NCL                   0.015   nucleolin 
ATAD2                 0.015   ATPase family, AAA domain containing 2 
COBLL1                0.015   COBL-like 1 
NPM1                  0.011   nucleophosmin 1 isoform 3 
NPM1                  0.011   nucleophosmin 1 isoform 2 
NPM1                  0.011   nucleophosmin 1 isoform 1 
CASZ1                 0.011   castor homolog 1, zinc finger isoform a 
RBM28                 0.011   RNA binding motif protein 28 
ZBTB39                0.011   zinc finger and BTB domain containing 39 
NRD1                  0.011   nardilysin isoform b 
NRD1                  0.011   nardilysin isoform a 
FKBP5                 0.011   FK506 binding protein 5 isoform 2 
FKBP5                 0.011   FK506 binding protein 5 isoform 1 
FKBP5                 0.011   FK506 binding protein 5 isoform 1 
FKBP5                 0.011   FK506 binding protein 5 isoform 1 
C19orf2               0.011   RPB5-mediating protein isoform b 
C19orf2               0.011   RPB5-mediating protein isoform a 
ARHGAP30              0.011   Rho GTPase activating protein 30 isoform 2 
ARHGAP30              0.011   Rho GTPase activating protein 30 isoform 1 
TOP2B                 0.007   DNA topoisomerase II, beta isozyme 
GRIK3                 0.007   glutamate receptor, ionotropic, kainate 3 precursor ...
USP11                 0.007   ubiquitin specific peptidase 11 
GOLIM4                0.007   golgi integral membrane protein 4 
PATL1                 0.007   protein associated with topoisomerase II homolog 1 ...
MKI67                 0.007   antigen identified by monoclonal antibody Ki-67 iso...
MKI67                 0.007   antigen identified by monoclonal antibody Ki-67 iso...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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