Guide to the Human Genome
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Name: GRIK3 Sequence: fasta or formatted (919aa) NCBI GI: 28605145
Description:

glutamate receptor, ionotropic, kainate 3 precursor

Referenced in:

Glutamate

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         67           2
 C cysteine            1.6         15           1
 D aspartate           5.4         50           2
 E glutamate           5.4         50           3
 F phenylalanine       4.8         44           2
 G glycine             6.3         58           2
 H histidine           2.3         21           2
 I isoleucine          6.9         63           3
 K lysine              5.2         48           2
 L leucine             9.8         90           2
 M methionine          3.6         33           2
 N asparagine          4.0         37           2
 P proline             4.4         40           2
 Q glutamine           3.3         30           2
 R arginine            5.7         52           2
 S serine              6.7         62           2
 T threonine           5.7         52           2
 V valine              6.1         56           2
 W tryptophan          2.1         19           2
 Y tyrosine            3.5         32           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glutamate receptor, ionotropic, kainate 3 precursor ... 
GRIK2                 0.793   glutamate receptor, ionotropic, kainate 2 isoform 1 ...
GRIK2                 0.748   glutamate receptor, ionotropic, kainate 2 isoform 2 ...
GRIK1                 0.725   glutamate receptor, ionotropic, kainate 1 isoform 2 ...
GRIK1                 0.714   glutamate receptor, ionotropic, kainate 1 isoform 1 p...
GRIK5                 0.372   glutamate receptor KA2 precursor 
GRIK4                 0.356   glutamate receptor KA1 precursor 
GRIA1                 0.316   glutamate receptor, ionotropic, AMPA 1 isoform 1 [H...
GRIA1                 0.315   glutamate receptor, ionotropic, AMPA 1 isoform 2 [H...
GRIA2                 0.310   glutamate receptor, ionotropic, AMPA 2 isoform 2 pr...
GRIA2                 0.310   glutamate receptor, ionotropic, AMPA 2 isoform 3 [H...
GRIA2                 0.310   glutamate receptor, ionotropic, AMPA 2 isoform 1 pre...
GRIA4                 0.307   glutamate receptor, ionotrophic, AMPA 4 isoform 1 p...
GRIA3                 0.306   glutamate receptor, ionotrophic, AMPA 3 isoform 2 p...
GRIA4                 0.305   glutamate receptor, ionotrophic, AMPA 4 isoform 2 p...
GRIA3                 0.304   glutamate receptor, ionotrophic, AMPA 3 isoform 1 p...
GRID1                 0.182   glutamate receptor, ionotropic, delta 1 precursor [H...
GRID2                 0.174   glutamate receptor, ionotropic, delta 2 
GRIN1                 0.121   NMDA receptor 1 isoform NR1-3 precursor 
GRIN1                 0.119   NMDA receptor 1 isoform NR1-1 precursor 
GRIN1                 0.119   NMDA receptor 1 isoform NR1-2 precursor 
GRIN2D                0.087   N-methyl-D-aspartate receptor subunit 2D precursor ...
GRIN2A                0.086   N-methyl-D-aspartate receptor subunit 2A isoform 2 ...
GRIN2A                0.086   N-methyl-D-aspartate receptor subunit 2A isoform 1 ...
GRIN2A                0.086   N-methyl-D-aspartate receptor subunit 2A isoform 1 pr...
GRIN2B                0.085   N-methyl-D-aspartate receptor subunit 2B precursor ...
GRIN2C                0.080   N-methyl-D-aspartate receptor subunit 2C precursor [...
GRIN3B                0.070   glutamate receptor, ionotropic, N-methyl-D-aspartate...
GRIN3A                0.070   glutamate receptor, ionotropic, N-methyl-D-aspartat...
GRIA4                 0.069   glutamate receptor, ionotrophic, AMPA 4 isoform 3 p...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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