Guide to the Human Genome
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Name: EIF1AD Sequence: fasta or formatted (165aa) NCBI GI: 31377656
Description:

eukaryotic translation initiation factor 1A domain containing

Referenced in:

Translation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8          8           2
 C cysteine            0.6          1           1
 D aspartate           4.2          7           2
 E glutamate          15.2         25           4
 F phenylalanine       3.6          6           1
 G glycine             4.2          7           1
 H histidine           3.6          6           1
 I isoleucine          4.2          7           1
 K lysine              6.7         11           1
 L leucine             6.1         10           1
 M methionine          1.2          2           1
 N asparagine          4.8          8           2
 P proline             4.8          8           1
 Q glutamine           6.7         11           3
 R arginine            6.7         11           2
 S serine              8.5         14           3
 T threonine           3.0          5           1
 V valine              8.5         14           2
 W tryptophan          1.2          2           1
 Y tyrosine            1.2          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   eukaryotic translation initiation factor 1A domain c... 
EIF1AX                0.055   X-linked eukaryotic translation initiation factor 1A ...
EIF1AY                0.052   eukaryotic translation initiation factor 1A, Y chrom...
TTBK1                 0.032   tau tubulin kinase 1 
MYT1                  0.029   myelin transcription factor 1 
ZEB1                  0.029   zinc finger E-box binding homeobox 1 isoform a [Hom...
ZEB1                  0.029   zinc finger E-box binding homeobox 1 isoform b [Hom...
TRIM44                0.029   DIPB protein 
LOXHD1                0.026   lipoxygenase homology domains 1 isoform 1 
ECM2                  0.026   extracellular matrix protein 2 precursor 
CCDC136               0.023   coiled-coil domain containing 136 
L1TD1                 0.023   LINE-1 type transposase domain containing 1 
WDR42A                0.023   H326 
CMYA5                 0.019   cardiomyopathy associated 5 
STAC3                 0.019   SH3 and cysteine rich domain 3 
RBM19                 0.016   RNA binding motif protein 19 
RBM19                 0.016   RNA binding motif protein 19 
RBM19                 0.016   RNA binding motif protein 19 
CHD6                  0.016   chromodomain helicase DNA binding protein 6 
RBM25                 0.016   RNA binding motif protein 25 
NOP56                 0.016   nucleolar protein 5A 
DEK                   0.016   DEK oncogene isoform 2 
DEK                   0.016   DEK oncogene isoform 1 
TMEM132C              0.016   transmembrane protein 132C 
C9orf75               0.016   hypothetical protein LOC286262 isoform 2 
C9orf75               0.016   hypothetical protein LOC286262 isoform 1 
EEF1D                 0.016   eukaryotic translation elongation factor 1 delta is...
EEF1D                 0.016   eukaryotic translation elongation factor 1 delta is...
EEF1D                 0.016   eukaryotic translation elongation factor 1 delta is...
EEF1D                 0.016   eukaryotic translation elongation factor 1 delta is...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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