Guide to the Human Genome
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Name: FKBP5 Sequence: fasta or formatted (268aa) NCBI GI: 224809331
Description:

FK506 binding protein 5 isoform 2

Referenced in:

Peptidylprolyl Isomerases
Tetratricopeptide Domains

Other entries for this name:
alt prot [457aa] FK506 binding protein 5 isoform 1
alt prot [457aa] FK506 binding protein 5 isoform 1
alt prot [457aa] FK506 binding protein 5 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         12           1
 C cysteine            2.6          7           1
 D aspartate           5.6         15           1
 E glutamate           9.0         24           2
 F phenylalanine       3.7         10           2
 G glycine            10.4         28           2
 H histidine           1.9          5           1
 I isoleucine          6.7         18           2
 K lysine             10.1         27           2
 L leucine             6.7         18           2
 M methionine          1.9          5           1
 N asparagine          4.1         11           2
 P proline             5.6         15           1
 Q glutamine           1.5          4           1
 R arginine            6.0         16           2
 S serine              6.0         16           2
 T threonine           4.5         12           2
 V valine              4.9         13           1
 W tryptophan          1.5          4           1
 Y tyrosine            3.0          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FK506 binding protein 5 isoform 2 
FKBP5                 0.811   FK506 binding protein 5 isoform 1 
FKBP5                 0.811   FK506 binding protein 5 isoform 1 
FKBP5                 0.811   FK506 binding protein 5 isoform 1 
FKBP4                 0.455   FK506 binding protein 52 
FKBP1B                0.142   FK506 binding protein 1B, 12.6 kDa isoform a 
FKBP1A                0.140   FK506 binding protein 1A, 12kDa 
FKBP1A                0.140   FK506 binding protein 1A, 12kDa 
FKBP2                 0.139   FK506 binding protein 2, 13kDa precursor 
FKBP2                 0.139   FK506 binding protein 2, 13kDa precursor 
FKBP2                 0.139   FK506 binding protein 2, 13kDa precursor 
FKBP6                 0.109   FK506 binding protein 6 isoform a 
FKBP6                 0.107   FK506 binding protein 6 isoform b 
FKBP3                 0.105   FK506 binding protein 3, 25kDa 
FKBP10                0.090   FK506 binding protein 10 
FKBP7                 0.088   FK506 binding protein 7 isoform b precursor 
FKBP7                 0.082   FK506 binding protein 7 isoform a precursor 
FKBP9                 0.075   FK506 binding protein 9 
FKBP1B                0.075   FK506 binding protein 1B, 12.6 kDa isoform b 
FKBP14                0.069   FK506 binding protein 14 
FKBP11                0.060   FK506 binding protein 11 isoform 1 precursor 
FKBP8                 0.049   FK506-binding protein 8 
FKBP15                0.047   FK506 binding protein 15, 133kDa 
FKBP11                0.043   FK506 binding protein 11 isoform 3 precursor 
AIP                   0.032   aryl hydrocarbon receptor interacting protein [Homo...
NHP2                  0.009   nucleolar protein family A, member 2 isoform a 
KIAA1107              0.006   hypothetical protein LOC23285 
LRRC31                0.006   leucine rich repeat containing 31 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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