Guide to the Human Genome
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Name: ARHGAP30 Sequence: fasta or formatted (1101aa) NCBI GI: 71040098
Description:

Rho GTPase activating protein 30 isoform 1

Referenced in:

Rho and Rac

Other entries for this name:
alt prot [890aa] Rho GTPase activating protein 30 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         94           3
 C cysteine            1.8         20           2
 D aspartate           5.2         57           2
 E glutamate          12.5        138           3
 F phenylalanine       1.9         21           1
 G glycine            10.4        114           2
 H histidine           1.6         18           1
 I isoleucine          2.4         26           2
 K lysine              4.4         48           3
 L leucine             8.4         92           2
 M methionine          1.5         16           1
 N asparagine          1.7         19           1
 P proline             8.4         92           2
 Q glutamine           4.5         50           2
 R arginine            6.7         74           2
 S serine              9.7        107           4
 T threonine           2.5         27           1
 V valine              5.5         61           2
 W tryptophan          0.8          9           1
 Y tyrosine            1.6         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rho GTPase activating protein 30 isoform 1 
ARHGAP30              0.611   Rho GTPase activating protein 30 isoform 2 
CDGAP                 0.152   Cdc42 GTPase-activating protein 
RICS                  0.146   Rho GTPase-activating protein isoform 1 
RICS                  0.146   Rho GTPase-activating protein isoform 2 
SNX26                 0.132   sorting nexin 26 
ARHGAP12              0.046   Rho GTPase activating protein 12 
ARHGAP27              0.045   Rho GTPase activating protein 27 isoform b 
ARHGAP27              0.045   Rho GTPase activating protein 27 isoform a 
ARHGAP15              0.044   ARHGAP15 
ARHGAP23              0.043   Rho GTPase activating protein 23 
CHN1                  0.043   chimerin (chimaerin) 1 isoform a 
CHN1                  0.043   chimerin (chimaerin) 1 isoform b 
ABR                   0.042   active breakpoint cluster region-related  protein i...
ABR                   0.042   active breakpoint cluster region-related  protein is...
ABR                   0.042   active breakpoint cluster region-related  protein is...
CHN2                  0.040   beta chimerin isoform 2 
CHN2                  0.040   beta chimerin isoform 1 
ARHGAP17              0.037   nadrin isoform 2 
RALBP1                0.037   ralA binding protein 1 
ARHGAP17              0.037   nadrin isoform 1 
FLJ32810              0.036   Rho-type GTPase-activating protein FLJ32810 
ARHGAP9               0.036   Rho GTPase activating protein 9 isoform 1 
RICH2                 0.036   Rho GTPase-activating protein RICH2 
ARHGAP9               0.036   Rho GTPase activating protein 9 isoform 3 
RPGR                  0.035   retinitis pigmentosa GTPase regulator isoform C [Hom...
GMIP                  0.035   GEM interacting protein 
SH3BP1                0.035   SH3-domain binding protein 1 
BCR                   0.035   breakpoint cluster region isoform 2 
BCR                   0.035   breakpoint cluster region isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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