Guide to the Human Genome
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Name: FKBP5 Sequence: fasta or formatted (457aa) NCBI GI: 224809327
Description:

FK506 binding protein 5 isoform 1

Referenced in:

Peptidylprolyl Isomerases
Tetratricopeptide Domains

Other entries for this name:
alt mRNA [457aa] FK506 binding protein 5 isoform 1
alt prot [268aa] FK506 binding protein 5 isoform 2
alt mRNA [457aa] FK506 binding protein 5 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         35           2
 C cysteine            2.0          9           2
 D aspartate           4.8         22           1
 E glutamate          12.5         57           3
 F phenylalanine       4.2         19           2
 G glycine             9.6         44           2
 H histidine           1.5          7           1
 I isoleucine          4.8         22           2
 K lysine             11.6         53           2
 L leucine             7.0         32           2
 M methionine          3.1         14           1
 N asparagine          3.9         18           2
 P proline             2.8         13           1
 Q glutamine           2.8         13           1
 R arginine            3.9         18           2
 S serine              4.8         22           2
 T threonine           3.9         18           2
 V valine              4.8         22           1
 W tryptophan          0.7          3           1
 Y tyrosine            3.5         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FK506 binding protein 5 isoform 1 
FKBP5                 1.000   FK506 binding protein 5 isoform 1 
FKBP5                 1.000   FK506 binding protein 5 isoform 1 
FKBP4                 0.549   FK506 binding protein 52 
FKBP5                 0.482   FK506 binding protein 5 isoform 2 
FKBP1B                0.085   FK506 binding protein 1B, 12.6 kDa isoform a 
FKBP1A                0.083   FK506 binding protein 1A, 12kDa 
FKBP1A                0.083   FK506 binding protein 1A, 12kDa 
FKBP2                 0.082   FK506 binding protein 2, 13kDa precursor 
FKBP2                 0.082   FK506 binding protein 2, 13kDa precursor 
FKBP2                 0.082   FK506 binding protein 2, 13kDa precursor 
FKBPL                 0.072   WAF-1/CIP1 stabilizing protein 39 
FKBP10                0.067   FK506 binding protein 10 
PPID                  0.065   peptidylprolyl isomerase D 
FKBP6                 0.065   FK506 binding protein 6 isoform a 
FKBP6                 0.063   FK506 binding protein 6 isoform b 
FKBP3                 0.062   FK506 binding protein 3, 25kDa 
FKBP9                 0.061   FK506 binding protein 9 
FKBP8                 0.060   FK506-binding protein 8 
RPAP3                 0.057   RNA polymerase II associated protein 3 isoform 2 [H...
RPAP3                 0.057   RNA polymerase II associated protein 3 isoform 3 [H...
RPAP3                 0.057   RNA polymerase II associated protein 3 isoform 1 [H...
TOMM34                0.056   translocase of outer mitochondrial membrane 34 [Homo...
FKBP7                 0.052   FK506 binding protein 7 isoform b precursor 
FKBP7                 0.049   FK506 binding protein 7 isoform a precursor 
SPAG1                 0.047   sperm associated antigen 1 
SPAG1                 0.047   sperm associated antigen 1 
AIPL1                 0.046   aryl hydrocarbon receptor interacting protein-like 1...
AIPL1                 0.046   aryl hydrocarbon receptor interacting protein-like 1...
AIPL1                 0.046   aryl hydrocarbon receptor interacting protein-like 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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