C19orf2 11771

Name: C19orf2	Sequence: fasta or formatted (535aa)		NCBI GI: 19924159
Description: RPB5-mediating protein isoform a		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [495aa] RPB5-mediating protein isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.9 37 2 C cysteine 1.5 8 1 D aspartate 9.5 51 13 E glutamate 10.3 55 3 F phenylalanine 3.2 17 1 G glycine 3.6 19 1 H histidine 2.8 15 1 I isoleucine 4.1 22 1 K lysine 8.0 43 2 L leucine 6.7 36 2 M methionine 1.1 6 1 N asparagine 4.5 24 1 P proline 6.4 34 3 Q glutamine 2.6 14 2 R arginine 5.4 29 2 S serine 9.0 48 3 T threonine 5.8 31 2 V valine 6.9 37 2 W tryptophan 0.6 3 1 Y tyrosine 1.1 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RPB5-mediating protein isoform a C19orf2 0.900 RPB5-mediating protein isoform b ATAD2 0.024 ATPase family, AAA domain containing 2 TMF1 0.023 TATA element modulatory factor 1 TAF7L 0.021 TATA box binding protein-associated factor, RNA poly... DSPP 0.020 dentin sialophosphoprotein preproprotein HRC 0.020 histidine rich calcium binding protein precursor [Hom... NPM1 0.019 nucleophosmin 1 isoform 3 NPM1 0.019 nucleophosmin 1 isoform 1 CENPB 0.018 centromere protein B SPOCK3 0.018 testican 3 isoform 1 SPOCK3 0.018 testican 3 isoform 2 NCL 0.018 nucleolin CASZ1 0.018 castor homolog 1, zinc finger isoform a SETD1B 0.018 SET domain containing 1B LMOD3 0.018 leiomodin 3 (fetal) NPM1 0.017 nucleophosmin 1 isoform 2 CASQ2 0.016 cardiac calsequestrin 2 precursor NPAS3 0.016 neuronal PAS domain protein 3 isoform 2 NPAS3 0.016 neuronal PAS domain protein 3 isoform 1 TSPYL2 0.016 TSPY-like 2 UBTF 0.016 upstream binding transcription factor, RNA polymera... UBTF 0.016 upstream binding transcription factor, RNA polymera... UBTF 0.016 upstream binding transcription factor, RNA polymerase... ESF1 0.016 ABT1-associated protein MTERFD2 0.016 MTERF domain containing 2 REST 0.015 RE1-silencing transcription factor DMP1 0.015 dentin matrix acidic phosphoprotein 1 isoform 1 precu... IWS1 0.015 IWS1 homolog ACRC 0.015 ACRC protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.