PATL1 10403

Name: PATL1	Sequence: fasta or formatted (770aa)		NCBI GI: 189217919
Description: protein associated with topoisomerase II homolog 1		Referenced in: RNases and RNA Stability
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 46 2 C cysteine 0.8 6 1 D aspartate 5.8 45 3 E glutamate 6.9 53 3 F phenylalanine 2.9 22 2 G glycine 4.9 38 2 H histidine 2.5 19 1 I isoleucine 3.5 27 2 K lysine 4.3 33 2 L leucine 12.5 96 3 M methionine 3.1 24 2 N asparagine 3.4 26 2 P proline 10.0 77 3 Q glutamine 7.1 55 3 R arginine 7.4 57 2 S serine 7.4 57 2 T threonine 3.9 30 2 V valine 5.1 39 2 W tryptophan 0.5 4 1 Y tyrosine 2.1 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protein associated with topoisomerase II homolog 1 ... PATL2 0.159 protein associated with topoisomerase II homolog 2 ... CREBBP 0.023 CREB binding protein isoform b CREBBP 0.023 CREB binding protein isoform a FLJ22184 0.022 PREDICTED: hypothetical protein FLJ22184 MICALL1 0.022 molecule interacting with Rab13 FLJ22184 0.021 PREDICTED: hypothetical protein FLJ22184 ESX1 0.021 extraembryonic, spermatogenesis, homeobox 1-like [Ho... PTPN23 0.020 protein tyrosine phosphatase, non-receptor type 23 [... FLJ22184 0.020 PREDICTED: hypothetical protein LOC80164 NACA 0.019 nascent polypeptide-associated complex alpha subuni... WASF2 0.018 WAS protein family, member 2 WIPF3 0.018 WAS/WASL interacting protein family, member 3 [Homo... WNK2 0.017 WNK lysine deficient protein kinase 2 FMNL1 0.017 formin-like 1 WASF3 0.016 WAS protein family, member 3 ZC3H4 0.016 zinc finger CCCH-type containing 4 RAPH1 0.016 Ras association and pleckstrin homology domains 1 is... TBKBP1 0.016 TBK1 binding protein 1 VPS37C 0.016 vacuolar protein sorting 37C SH3BP1 0.016 SH3-domain binding protein 1 CPSF6 0.016 cleavage and polyadenylation specific factor 6, 68 ... BRD4 0.015 bromodomain-containing protein 4 isoform long RBM33 0.015 RNA binding motif protein 33 AMOT 0.015 angiomotin isoform 1 SETD1B 0.015 SET domain containing 1B AUTS2 0.015 autism susceptibility candidate 2 isoform 2 AUTS2 0.015 autism susceptibility candidate 2 isoform 1 PBRM1 0.015 polybromo 1 isoform 1 PBRM1 0.015 polybromo 1 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.