USP11 23658

Name: USP11	Sequence: fasta or formatted (963aa)		NCBI GI: 24234683
Description: ubiquitin specific peptidase 11		Referenced in: Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 58 6 C cysteine 2.2 21 1 D aspartate 6.4 62 2 E glutamate 8.4 81 2 F phenylalanine 4.0 39 2 G glycine 5.8 56 2 H histidine 3.1 30 2 I isoleucine 3.5 34 2 K lysine 4.7 45 3 L leucine 9.3 90 3 M methionine 1.8 17 2 N asparagine 4.4 42 3 P proline 6.1 59 2 Q glutamine 4.3 41 2 R arginine 6.1 59 4 S serine 6.7 65 2 T threonine 4.2 40 2 V valine 7.3 70 2 W tryptophan 1.8 17 1 Y tyrosine 3.8 37 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquitin specific peptidase 11 USP15 0.398 ubiquitin specific peptidase 15 USP4 0.395 ubiquitin specific protease 4 isoform b USP4 0.386 ubiquitin specific protease 4 isoform a USP19 0.185 ubiquitin thioesterase 19 USP32 0.136 ubiquitin specific protease 32 USP6 0.115 ubiquitin specific protease 6 USP8 0.084 ubiquitin specific peptidase 8 USP8 0.084 ubiquitin specific peptidase 8 USP8 0.084 ubiquitin specific peptidase 8 USP2 0.066 ubiquitin specific peptidase 2 isoform b USP2 0.066 ubiquitin specific peptidase 2 isoform a USP43 0.060 ubiquitin specific protease 43 USP31 0.058 ubiquitin specific peptidase 31 USP3 0.052 ubiquitin thiolesterase 3 USP21 0.046 ubiquitin-specific protease 21 USP21 0.046 ubiquitin-specific protease 21 USP33 0.042 ubiquitin specific protease 33 isoform 3 USP33 0.042 ubiquitin specific protease 33 isoform 1 USP33 0.042 ubiquitin specific protease 33 isoform 2 LOC100294407 0.041 PREDICTED: similar to hCG2039376 USP20 0.041 ubiquitin specific protease 20 USP20 0.041 ubiquitin specific protease 20 USP20 0.041 ubiquitin specific protease 20 USP51 0.036 ubiquitin specific protease 51 USP27X 0.033 X-linked ubiquitin thioesterase 27 USP22 0.032 ubiquitin thiolesterase 22 USP16 0.030 ubiquitin specific protease 16 isoform b USP16 0.030 ubiquitin specific protease 16 isoform a USP16 0.030 ubiquitin specific protease 16 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.