Guide to the Human Genome
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Name: ARHGAP30 Sequence: fasta or formatted (890aa) NCBI GI: 71040096
Description:

Rho GTPase activating protein 30 isoform 2

Referenced in:

Rho and Rac

Other entries for this name:
alt prot [1101aa] Rho GTPase activating protein 30 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         74           3
 C cysteine            2.1         19           2
 D aspartate           4.6         41           2
 E glutamate           9.7         86           3
 F phenylalanine       2.4         21           1
 G glycine             9.8         87           2
 H histidine           1.8         16           1
 I isoleucine          2.8         25           2
 K lysine              3.4         30           3
 L leucine             9.8         87           2
 M methionine          1.6         14           1
 N asparagine          2.0         18           1
 P proline             9.9         88           2
 Q glutamine           4.3         38           2
 R arginine            6.9         61           2
 S serine             10.3         92           4
 T threonine           2.5         22           1
 V valine              5.5         49           2
 W tryptophan          0.9          8           1
 Y tyrosine            1.6         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rho GTPase activating protein 30 isoform 2 
ARHGAP30              0.755   Rho GTPase activating protein 30 isoform 1 
CDGAP                 0.188   Cdc42 GTPase-activating protein 
RICS                  0.181   Rho GTPase-activating protein isoform 1 
RICS                  0.181   Rho GTPase-activating protein isoform 2 
SNX26                 0.163   sorting nexin 26 
ARHGAP12              0.056   Rho GTPase activating protein 12 
ARHGAP27              0.055   Rho GTPase activating protein 27 isoform b 
ARHGAP27              0.055   Rho GTPase activating protein 27 isoform a 
ARHGAP15              0.054   ARHGAP15 
ARHGAP23              0.053   Rho GTPase activating protein 23 
CHN1                  0.053   chimerin (chimaerin) 1 isoform a 
CHN1                  0.053   chimerin (chimaerin) 1 isoform b 
ABR                   0.051   active breakpoint cluster region-related  protein i...
ABR                   0.051   active breakpoint cluster region-related  protein is...
ABR                   0.051   active breakpoint cluster region-related  protein is...
CHN2                  0.049   beta chimerin isoform 2 
CHN2                  0.049   beta chimerin isoform 1 
ARHGAP17              0.046   nadrin isoform 2 
RALBP1                0.046   ralA binding protein 1 
ARHGAP17              0.046   nadrin isoform 1 
FLJ32810              0.044   Rho-type GTPase-activating protein FLJ32810 
ARHGAP9               0.044   Rho GTPase activating protein 9 isoform 1 
RICH2                 0.044   Rho GTPase-activating protein RICH2 
ARHGAP9               0.044   Rho GTPase activating protein 9 isoform 3 
GMIP                  0.043   GEM interacting protein 
SH3BP1                0.043   SH3-domain binding protein 1 
BCR                   0.043   breakpoint cluster region isoform 2 
BCR                   0.043   breakpoint cluster region isoform 1 
ARHGAP21              0.042   Rho GTPase activating protein 21 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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