Guide to the Human Genome
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Name: ZBTB39 Sequence: fasta or formatted (712aa) NCBI GI: 7662072
Description:

zinc finger and BTB domain containing 39

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         42           2
 C cysteine            4.2         30           1
 D aspartate           5.9         42           3
 E glutamate           6.0         43           3
 F phenylalanine       4.8         34           2
 G glycine             6.5         46           3
 H histidine           5.5         39           1
 I isoleucine          3.4         24           2
 K lysine              5.5         39           2
 L leucine            10.1         72           2
 M methionine          2.0         14           2
 N asparagine          4.6         33           2
 P proline             5.3         38           6
 Q glutamine           3.9         28           1
 R arginine            3.8         27           2
 S serine              8.7         62           2
 T threonine           5.9         42           2
 V valine              5.3         38           2
 W tryptophan          0.4          3           1
 Y tyrosine            2.2         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger and BTB domain containing 39 
ZBTB16                0.086   promyelocytic leukemia zinc finger protein 
ZBTB16                0.086   promyelocytic leukemia zinc finger protein 
ZNF816A               0.083   zinc finger protein 816A 
ZNF208                0.082   zinc finger protein 208 
ZFP2                  0.081   zinc finger protein 2 homolog 
ZNF611                0.081   zinc finger protein 611 isoform b 
ZNF611                0.081   zinc finger protein 611 isoform a 
ZNF611                0.081   zinc finger protein 611 isoform a 
ZNF611                0.081   zinc finger protein 611 isoform a 
LOC388559             0.079   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.079   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.079   PREDICTED: hypothetical protein LOC388559 
ZFP28                 0.078   zinc finger protein 28 
LOC100292052          0.078   PREDICTED: similar to hCG1773661 
LOC100287226          0.078   PREDICTED: similar to hCG1773661 
LOC100287226          0.078   PREDICTED: hypothetical protein XP_002343677 
ZNF836                0.077   zinc finger protein 836 
ZNF256                0.077   zinc finger protein 256 
ZNF184                0.076   zinc finger protein 184 
ZNF846                0.075   zinc finger protein 846 
ZNF808                0.075   zinc finger protein 808 
ZNF596                0.075   zinc finger protein 596 
ZNF596                0.075   zinc finger protein 596 
ZNF596                0.075   zinc finger protein 596 
ZNF433                0.075   zinc finger protein 433 
DKFZp686E2433         0.075   hypothetical protein LOC345462 
ZNF470                0.075   zinc finger protein 470 
ZNF181                0.075   zinc finger protein 181 isoform 2 
ZNF181                0.075   zinc finger protein 181 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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