OPN3 35278

Name: OPN3	Sequence: fasta or formatted (402aa)		NCBI GI: 71999131
Description: opsin 3		Referenced in: Photoreceptors and Related Functions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 22 2 C cysteine 2.7 11 1 D aspartate 4.2 17 2 E glutamate 1.7 7 1 F phenylalanine 5.0 20 1 G glycine 8.2 33 3 H histidine 2.0 8 1 I isoleucine 7.2 29 2 K lysine 4.2 17 3 L leucine 13.7 55 3 M methionine 2.0 8 1 N asparagine 3.2 13 2 P proline 4.0 16 1 Q glutamine 2.0 8 1 R arginine 5.2 21 2 S serine 8.0 32 3 T threonine 4.7 19 1 V valine 9.5 38 2 W tryptophan 2.7 11 1 Y tyrosine 4.2 17 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 opsin 3 RHO 0.185 rhodopsin RRH 0.179 peropsin OPN4 0.166 opsin 4 isoform 1 OPN4 0.156 opsin 4 isoform 2 OPN1SW 0.153 opsin 1 (cone pigments), short-wave-sensitive OPN1LW 0.152 opsin 1 (cone pigments), long-wave-sensitive OPN5 0.147 opsin 5 isoform 1 OPN1MW2 0.143 opsin 1 (cone pigments), medium-wave-sensitive 2 [H... OPN1MW 0.143 opsin 1 (cone pigments), medium-wave-sensitive SSTR1 0.106 somatostatin receptor 1 RGR 0.097 retinal G-protein coupled receptor isoform 2 GPR83 0.097 G protein-coupled receptor 83 TACR2 0.096 tachykinin receptor 2 RGR 0.094 retinal G-protein coupled receptor isoform 1 NPY1R 0.094 neuropeptide Y receptor Y1 SSTR4 0.094 somatostatin receptor 4 ADORA3 0.093 adenosine A3 receptor isoform 2 QRFPR 0.093 G protein-coupled receptor 103 GALR1 0.089 galanin receptor 1 RGR 0.086 retinal G-protein coupled receptor isoform 3 OPRK1 0.086 opioid receptor, kappa 1 SSTR2 0.086 somatostatin receptor 2 GPR45 0.083 G protein-coupled receptor 45 GPR161 0.083 G protein-coupled receptor 161 isoform 2 SSTR5 0.081 somatostatin receptor 5 GPR135 0.079 G protein-coupled receptor 135 ADORA2A 0.078 adenosine A2a receptor ADORA2B 0.078 adenosine A2b receptor TACR3 0.078 tachykinin receptor 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.