Guide to the Human Genome
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Name: ANKRD7 Sequence: fasta or formatted (254aa) NCBI GI: 118150656
Description:

ankyrin repeat domain 7

Referenced in:

Ankyrin Family
Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         17           2
 C cysteine            2.8          7           1
 D aspartate           5.9         15           1
 E glutamate           5.5         14           1
 F phenylalanine       2.8          7           1
 G glycine             4.3         11           1
 H histidine           2.8          7           1
 I isoleucine          3.9         10           1
 K lysine             10.6         27           3
 L leucine            13.8         35           3
 M methionine          2.0          5           1
 N asparagine          6.7         17           3
 P proline             3.1          8           2
 Q glutamine           5.1         13           2
 R arginine            4.3         11           1
 S serine              4.7         12           1
 T threonine           3.1          8           1
 V valine              7.1         18           2
 W tryptophan          0.4          1           1
 Y tyrosine            4.3         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat domain 7 
ANKRD20A3             0.361   ankyrin repeat domain 20 family, member A3 
ANKRD20A2             0.361   ankyrin repeat domain 20 family, member A2 
ANKRD20A1             0.361   ankyrin repeat domain 20 family, member A1 
ANKRD20A4             0.361   ankyrin repeat domain 20 family, member A4 
ANKRD18B              0.357   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.357   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.352   PREDICTED: ankyrin repeat domain 18B 
ANKRD26               0.350   ankyrin repeat domain 26 
ANKRD62               0.346   PREDICTED: ankyrin repeat domain 62 
ANKRD62               0.346   PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo...
ANKRD62               0.346   PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo...
POTEA                 0.342   POTE ankyrin domain family, member A isoform 2 [Homo...
ANKRD18A              0.340   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.340   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.340   PREDICTED: ankyrin repeat domain 18A 
LOC730465             0.338   PREDICTED: similar to hCG1793014 
ANKRD20A5             0.338   PREDICTED: ankyrin repeat domain 20 family, member ...
ANKRD20A5             0.338   PREDICTED: ankyrin repeat domain 20 family, member ...
POTEF                 0.328   prostate, ovary, testis expressed protein on chromo...
POTEE                 0.326   protein expressed in prostate, ovary, testis, and p...
LOC653781             0.324   PREDICTED: similar to protein expressed in prostate...
LOC653269             0.324   PREDICTED: similar to protein expressed in prostate...
LOC653269             0.324   PREDICTED: similar to protein expressed in prostate,...
POTEH                 0.322   ANKRD26-like family C, member 3 
POTEG                 0.320   POTE ankyrin domain family, member G 
P704P                 0.320   prostate-specific P704P 
POTEB                 0.320   protein expressed in prostate, ovary, testis, and pl...
LOC100287399          0.320   PREDICTED: hypothetical protein XP_002343353 
POTEC                 0.318   ANKRD26-like family B, member 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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