Guide to the Human Genome
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Name: ANKRD30B Sequence: fasta or formatted (1392aa) NCBI GI: 222537750
Description:

ankyrin repeat domain 30B

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         88           3
 C cysteine            1.9         27           1
 D aspartate           4.7         66           2
 E glutamate          11.5        160           3
 F phenylalanine       2.7         37           1
 G glycine             3.7         51           1
 H histidine           1.9         27           2
 I isoleucine          3.7         52           2
 K lysine             11.1        154           2
 L leucine             9.3        130           3
 M methionine          1.9         27           1
 N asparagine          5.4         75           2
 P proline             4.2         59           2
 Q glutamine           5.7         80           2
 R arginine            3.9         54           2
 S serine              7.0         98           2
 T threonine           7.3        101           2
 V valine              5.0         69           2
 W tryptophan          0.6          9           1
 Y tyrosine            2.0         28           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat domain 30B 
ANKRD30A              0.577   ankyrin repeat domain 30A 
ANKRD26               0.162   ankyrin repeat domain 26 
CCDC144A              0.113   coiled-coil domain containing 144A 
LOC730465             0.112   PREDICTED: similar to hCG1793014 
LOC400986             0.111   PREDICTED: protein immuno-reactive with anti-PTH po...
ANKRD36B              0.108   ankyrin repeat domain 36B 
ANKRD36               0.107   PREDICTED: ankyrin repeat domain 36 
LOC400986             0.106   PREDICTED: protein immuno-reactive with anti-PTH po...
ANKRD62               0.105   PREDICTED: ankyrin repeat domain 62 
ANKRD62               0.105   PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo...
ANKRD62               0.105   PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo...
LOC730658             0.102   PREDICTED: similar to UPF0634 protein KIAA1641 [Hom...
ANKRD20A5             0.098   PREDICTED: ankyrin repeat domain 20 family, member ...
ANKRD20A5             0.098   PREDICTED: ankyrin repeat domain 20 family, member ...
LOC100132257          0.091   PREDICTED: similar to Putative ankyrin repeat domai...
ANKRD20A3             0.091   ankyrin repeat domain 20 family, member A3 
ANKRD20A2             0.090   ankyrin repeat domain 20 family, member A2 
ANKRD20A1             0.090   ankyrin repeat domain 20 family, member A1 
ANKRD20A4             0.089   ankyrin repeat domain 20 family, member A4 
LOC729722             0.089   PREDICTED: ankyrin repeat domain-containing protein...
LOC729722             0.089   PREDICTED: ankyrin repeat domain-containing protein...
LOC730465             0.088   PREDICTED: similar to Putative ankyrin repeat domai...
LOC643321             0.079   PREDICTED: similar to hCG1644292 
LOC643321             0.078   PREDICTED: similar to hCG1644292 
LOC729549             0.077   PREDICTED: similar to hCG1793014 
LOC729549             0.077   PREDICTED: similar to hCG1793014 
LOC729549             0.075   PREDICTED: similar to UNCoordinated family member (...
POTEA                 0.075   POTE ankyrin domain family, member A isoform 2 [Homo...
POTEB                 0.073   protein expressed in prostate, ovary, testis, and pl...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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