Guide to the Human Genome
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Name: ANKS6 Sequence: fasta or formatted (871aa) NCBI GI: 67906195
Description:

ankyrin repeat and sterile alpha motif domain containing 6

Referenced in:

Ankyrin Family
Additional Interaction Domain Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.2         89           4
 C cysteine            0.6          5           1
 D aspartate           5.4         47           2
 E glutamate           5.5         48           2
 F phenylalanine       2.2         19           1
 G glycine             9.5         83           4
 H histidine           3.6         31           3
 I isoleucine          2.0         17           1
 K lysine              4.8         42           2
 L leucine            10.9         95           3
 M methionine          1.8         16           1
 N asparagine          3.4         30           1
 P proline             7.9         69           2
 Q glutamine           3.7         32           2
 R arginine            5.7         50           2
 S serine              9.8         85           5
 T threonine           5.5         48           2
 V valine              5.9         51           2
 W tryptophan          0.9          8           2
 Y tyrosine            0.7          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat and sterile alpha motif domain contai... 
ANKRD50               0.079   ankyrin repeat domain 50 
ANKHD1                0.072   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.072   ANKHD1-EIF4EBP3 protein 
ANKHD1                0.072   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.072   ankyrin repeat and KH domain containing 1 isoform 2 ...
ANKRD17               0.070   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.070   ankyrin repeat domain protein 17 isoform b 
ANK1                  0.061   ankyrin 1 isoform 9 
ANK1                  0.061   ankyrin 1 isoform 1 
ANK1                  0.061   ankyrin 1 isoform 3 
ANK1                  0.061   ankyrin 1 isoform 2 
ANK1                  0.061   ankyrin 1 isoform 4 
ANK3                  0.061   ankyrin 3 isoform 1 
ANKK1                 0.055   ankyrin repeat and kinase domain containing 1 
ANK2                  0.054   ankyrin 2 isoform 3 
ANK2                  0.054   ankyrin 2 isoform 2 
ANK2                  0.054   ankyrin 2 isoform 1 
ANKDD1A               0.051   ankyrin repeat and death domain containing 1A 
KIDINS220             0.050   kinase D-interacting substrate of 220 kDa 
ANKRD29               0.045   ankyrin repeat domain 29 
ANKRD28               0.045   ankyrin repeat domain 28 
ANKRD52               0.045   ankyrin repeat domain 52 
TANC1                 0.044   tetratricopeptide repeat, ankyrin repeat and coiled...
TANC1                 0.044   tetratricopeptide repeat, ankyrin repeat and coiled...
TANC2                 0.044   tetratricopeptide repeat, ankyrin repeat and coiled...
LOC441869             0.041   hypothetical protein LOC441869 
ANKRD44               0.041   ankyrin repeat domain 44 
TNNI3K                0.041   TNNI3 interacting kinase isoform b 
TNNI3K                0.041   TNNI3 interacting kinase isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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