Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 12669911
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|12669911 E2F transcription factor 1 [Homo sapiens]
(437 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|12669911 E2F transcription factor 1 [Homo sapiens] 868 0.0
gi|4503433 E2F transcription factor 3 [Homo sapiens] 278 7e-75
gi|4758226 E2F transcription factor 2 [Homo sapiens] 266 2e-71
gi|109637795 E2F transcription factor 6 [Homo sapiens] 160 3e-39
gi|134142809 E2F transcription factor 5 isoform 2 [Homo sapiens] 146 3e-35
gi|134142811 E2F transcription factor 5 isoform 1 [Homo sapiens] 144 2e-34
gi|12669915 E2F transcription factor 4 [Homo sapiens] 137 2e-32
gi|134142813 E2F transcription factor 5 isoform 3 [Homo sapiens] 56 6e-08
gi|38505226 E2F family member 8 [Homo sapiens] 55 1e-07
gi|145580626 E2F transcription factor 7 [Homo sapiens] 50 3e-06
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 41 0.002
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap... 40 0.004
gi|24308458 Lix1 homolog (mouse) like [Homo sapiens] 40 0.004
gi|148806884 AKT1 substrate 1 (proline-rich) [Homo sapiens] 40 0.004
gi|148806906 AKT1 substrate 1 (proline-rich) [Homo sapiens] 40 0.004
gi|148806896 AKT1 substrate 1 (proline-rich) [Homo sapiens] 40 0.004
gi|6005900 transcription factor Dp-1 [Homo sapiens] 40 0.005
gi|153791839 sodium channel associated protein 1 [Homo sapiens] 40 0.005
gi|21359935 Down syndrome cell adhesion molecule like 1 [Homo sa... 39 0.007
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 39 0.007
gi|110832843 TBP-associated factor 4 [Homo sapiens] 39 0.012
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 39 0.012
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 38 0.021
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 38 0.021
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 38 0.021
gi|34452705 bromodomain containing 8 isoform 1 [Homo sapiens] 38 0.021
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 37 0.035
gi|122937271 WAS protein homolog associated with actin, golgi me... 37 0.035
gi|73476377 LBXCOR1 homolog [Homo sapiens] 37 0.046
gi|157785645 SPEG complex locus [Homo sapiens] 37 0.046
>gi|12669911 E2F transcription factor 1 [Homo sapiens]
Length = 437
Score = 868 bits (2242), Expect = 0.0
Identities = 437/437 (100%), Positives = 437/437 (100%)
Query: 1 MALAGAPAGGPCAPALEALLGAGALRLLDSSQIVIISAAQDASAPPAPTGPAAPAAGPCD 60
MALAGAPAGGPCAPALEALLGAGALRLLDSSQIVIISAAQDASAPPAPTGPAAPAAGPCD
Sbjct: 1 MALAGAPAGGPCAPALEALLGAGALRLLDSSQIVIISAAQDASAPPAPTGPAAPAAGPCD 60
Query: 61 PDLLLFATPQAPRPTPSAPRPALGRPPVKRRLDLETDHQYLAESSGPARGRGRHPGKGVK 120
PDLLLFATPQAPRPTPSAPRPALGRPPVKRRLDLETDHQYLAESSGPARGRGRHPGKGVK
Sbjct: 61 PDLLLFATPQAPRPTPSAPRPALGRPPVKRRLDLETDHQYLAESSGPARGRGRHPGKGVK 120
Query: 121 SPGEKSRYETSLNLTTKRFLELLSHSADGVVDLNWAAEVLKVQKRRIYDITNVLEGIQLI 180
SPGEKSRYETSLNLTTKRFLELLSHSADGVVDLNWAAEVLKVQKRRIYDITNVLEGIQLI
Sbjct: 121 SPGEKSRYETSLNLTTKRFLELLSHSADGVVDLNWAAEVLKVQKRRIYDITNVLEGIQLI 180
Query: 181 AKKSKNHIQWLGSHTTVGVGGRLEGLTQDLRQLQESEQQLDHLMNICTTQLRLLSEDTDS 240
AKKSKNHIQWLGSHTTVGVGGRLEGLTQDLRQLQESEQQLDHLMNICTTQLRLLSEDTDS
Sbjct: 181 AKKSKNHIQWLGSHTTVGVGGRLEGLTQDLRQLQESEQQLDHLMNICTTQLRLLSEDTDS 240
Query: 241 QRLAYVTCQDLRSIADPAEQMVMVIKAPPETQLQAVDSSENFQISLKSKQGPIDVFLCPE 300
QRLAYVTCQDLRSIADPAEQMVMVIKAPPETQLQAVDSSENFQISLKSKQGPIDVFLCPE
Sbjct: 241 QRLAYVTCQDLRSIADPAEQMVMVIKAPPETQLQAVDSSENFQISLKSKQGPIDVFLCPE 300
Query: 301 ETVGGISPGKTPSQEVTSEEENRATDSATIVSPPPSSPPSSLTTDPSQSLLSLEQEPLLS 360
ETVGGISPGKTPSQEVTSEEENRATDSATIVSPPPSSPPSSLTTDPSQSLLSLEQEPLLS
Sbjct: 301 ETVGGISPGKTPSQEVTSEEENRATDSATIVSPPPSSPPSSLTTDPSQSLLSLEQEPLLS 360
Query: 361 RMGSLRAPVDEDRLSPLVAADSLLEHVREDFSGLLPEEFISLSPPHEALDYHFGLEEGEG 420
RMGSLRAPVDEDRLSPLVAADSLLEHVREDFSGLLPEEFISLSPPHEALDYHFGLEEGEG
Sbjct: 361 RMGSLRAPVDEDRLSPLVAADSLLEHVREDFSGLLPEEFISLSPPHEALDYHFGLEEGEG 420
Query: 421 IRDLFDCDFGDLTPLDF 437
IRDLFDCDFGDLTPLDF
Sbjct: 421 IRDLFDCDFGDLTPLDF 437
>gi|4503433 E2F transcription factor 3 [Homo sapiens]
Length = 465
Score = 278 bits (711), Expect = 7e-75
Identities = 183/444 (41%), Positives = 245/444 (55%), Gaps = 50/444 (11%)
Query: 2 ALAGAPAGGPCAPALEALLGAGALRLLDSSQIVIISAAQDASAPPAPTGPAAPAAGPCDP 61
AL +P A A A + ++S S+ Q + P P+AP A
Sbjct: 37 ALLASPGFAAAAAAAAAPGAYIQILTTNTSTTSCSSSLQSGAVAAGPLLPSAPGAEQTAG 96
Query: 62 DLLLFATPQAPRPTPSAPR--PALGR--------PPVKRRLDL-ETDHQYLAESSGPARG 110
LL + TP P + PALGR PP KRRL+L E+ HQYL++ +G
Sbjct: 97 SLL-YTTPHGPSSRAGLLQQPPALGRGGSGGGGGPPAKRRLELGESGHQYLSDGLKTPKG 155
Query: 111 RGR------HPGKGVKSPGEKSRYETSLNLTTKRFLELLSHSADGVVDLNWAAEVLKVQK 164
+GR K KSP EK+RY+TSL L TK+F++LLS S DGV+DLN AAEVLKVQK
Sbjct: 156 KGRAALRSPDSPKTPKSPSEKTRYDTSLGLLTKKFIQLLSQSPDGVLDLNKAAEVLKVQK 215
Query: 165 RRIYDITNVLEGIQLIAKKSKNHIQWLGSHTTV--GVGGRLEGLTQDLRQLQESEQQLDH 222
RRIYDITNVLEGI LI KKSKN++QW+G + G+ + +GL++++ +L + E++LD
Sbjct: 216 RRIYDITNVLEGIHLIKKKSKNNVQWMGCSLSEDGGMLAQCQGLSKEVTELSQEEKKLDE 275
Query: 223 LMNICTTQLRLLSEDTDSQRLAYVTCQDLRSIADPAEQMVMVIKAPPETQLQAVDSSENF 282
L+ CT L+LL+ED+++QRLAYVT QD+R I+ +Q V+V+KAPPET+L+ DS E+
Sbjct: 276 LIQSCTLDLKLLTEDSENQRLAYVTYQDIRKISGLKDQTVIVVKAPPETRLEVPDSIESL 335
Query: 283 QISLKSKQGPIDVFLCPEETVGGISPGKTPSQEVTSEEENRATDSATIVSPPPSSPPSSL 342
QI L S QGPI+V+LCPEET SP KT +Q+ P P+S +
Sbjct: 336 QIHLASTQGPIEVYLCPEETETH-SPMKTNNQDHNGN------------IPKPASKDLAS 382
Query: 343 TTDPSQSLLSLEQEPLLSRMGSLRAPVDEDRLSPLVAADSLLEHVREDFSGLLPEEFISL 402
T G V LSPL + +LL+ + L F++L
Sbjct: 383 TNS-----------------GHSDCSVSMGNLSPLASPANLLQQTEDQIPSNLEGPFVNL 425
Query: 403 SPPHEALDYHFGLEEGEGIRDLFD 426
PP DY L E EGI DLFD
Sbjct: 426 LPPLLQEDYLLSLGEEEGISDLFD 449
>gi|4758226 E2F transcription factor 2 [Homo sapiens]
Length = 437
Score = 266 bits (681), Expect = 2e-71
Identities = 180/403 (44%), Positives = 227/403 (56%), Gaps = 39/403 (9%)
Query: 49 TGPAAPAAGPCDPDLLLFATPQAPRPTPSAPRPALGRPPVKRRLDLETDHQYLAESSGPA 108
T P A A G C L ATP P PA GR P KR+LDLE + +
Sbjct: 52 TAPPAAAPGTC-----LDATPHGPEGQVVRCLPA-GRLPAKRKLDLEGIGRPVVPEFPTP 105
Query: 109 RGR-----GRHPGKGVKSPGEKSRYETSLNLTTKRFLELLSHSADGVVDLNWAAEVLKVQ 163
+G+ G K KSPGEK+RY+TSL L TK+F+ LLS S DGV+DLNWAAEVL VQ
Sbjct: 106 KGKCIRVDGLPSPKTPKSPGEKTRYDTSLGLLTKKFIYLLSESEDGVLDLNWAAEVLDVQ 165
Query: 164 KRRIYDITNVLEGIQLIAKKSKNHIQWL--GSHTTVGVGGRLEGLTQDLRQLQESEQQLD 221
KRRIYDITNVLEGIQLI KK+KN+IQW+ G G+ + L Q+L++L +EQ LD
Sbjct: 166 KRRIYDITNVLEGIQLIRKKAKNNIQWVGRGMFEDPTRPGKQQQLGQELKELMNTEQALD 225
Query: 222 HLMNICTTQLRLLSEDTDSQRLAYVTCQDLRSIADPAEQMVMVIKAPPETQLQAVDSSE- 280
L+ C+ + L+ED ++RLAYVT QD+R++ + EQ V+ +KAPP+T+L+ D +E
Sbjct: 226 QLIQSCSLSFKHLTEDKANKRLAYVTYQDIRAVGNFKEQTVIAVKAPPQTRLEVPDRTED 285
Query: 281 NFQISLKSKQGPIDVFLCPEETVGGISPGKTPSQEVTSEEENRATDSATIVSPPPSSPPS 340
N QI LKS QGPI+V+LCPEE QE S E ++T+ P S+ PS
Sbjct: 286 NLQIYLKSTQGPIEVYLCPEEV-----------QEPDSPSEEPLPSTSTLCPSPDSAQPS 334
Query: 341 SLTTDPSQSLLSLEQEPLLSRMGSLRAPVDEDRLSPLVAADSLLE-------HVREDFSG 393
S +TDPS + P + P L PL A DSLLE + F
Sbjct: 335 S-STDPSIMEPTASSVPAPAPTPQQAPP--PPSLVPLEATDSLLELPHPLLQQTEDQFLS 391
Query: 394 ---LLPEEFISLSPPHEALDYHFGLEEGEGIRDLFDC-DFGDL 432
IS SP + DY +GLE GEGI DLFD D GDL
Sbjct: 392 PTLACSSPLISFSPSLDQDDYLWGLEAGEGISDLFDSYDLGDL 434
>gi|109637795 E2F transcription factor 6 [Homo sapiens]
Length = 281
Score = 160 bits (404), Expect = 3e-39
Identities = 104/295 (35%), Positives = 155/295 (52%), Gaps = 28/295 (9%)
Query: 61 PDLLLFATPQAPRPTPSAPRPALGRPPVKRRLDLETDHQYLAESSGPARGRGRHPGKGVK 120
P LLL T + R P G P K R++LE + QY++ VK
Sbjct: 11 PSLLLDPTEETVRRRCRDPINVEGLLPSKIRINLEDNVQYVS----------MRKALKVK 60
Query: 121 SPGEKSRYETSLNLTTKRFLELLSHSADGVVDLNWAAEVLKVQKRRIYDITNVLEGIQLI 180
P R++ SL T++F++L+ + G++DLN A L V+KRR+YDITNVL+GI L+
Sbjct: 61 RP----RFDVSLVYLTRKFMDLVRSAPGGILDLNKVATKLGVRKRRVYDITNVLDGIDLV 116
Query: 181 AKKSKNHIQWLGSH-TTVGVGGRLEGLTQDLRQLQESEQQLDHLMNICTTQLRLLSEDTD 239
KKSKNHI+W+GS + G + + L ++L L E LD L+ C QL L++D +
Sbjct: 117 EKKSKNHIRWIGSDLSNFGAVPQQKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKE 176
Query: 240 SQRLAYVTCQDLRSIADPAEQMVMVIKAPPETQLQA-VDSSENFQISLKSKQGPIDVFLC 298
++RLAYVT QD+ SI EQ+V+ +KAP ET+L ++ + ++S GPIDV+LC
Sbjct: 177 NERLAYVTYQDIHSIQAFHEQIVIAVKAPAETRLDVPAPREDSITVHIRSTNGPIDVYLC 236
Query: 299 PEETVGGISPGKTPSQEVTSEEENRATDSATIVSPPPSSPPSSLTTDPSQSLLSL 353
E Q TS + + +++ S P P S+ LL +
Sbjct: 237 EVE------------QGQTSNKRSEGVGTSSSESTHPEGPEEEENPQQSEELLEV 279
>gi|134142809 E2F transcription factor 5 isoform 2 [Homo sapiens]
Length = 345
Score = 146 bits (369), Expect = 3e-35
Identities = 132/407 (32%), Positives = 185/407 (45%), Gaps = 91/407 (22%)
Query: 42 ASAPPAPTGPAAPAAGPCDPDLLLFATPQAPRPTPSAPRPALGRPPVKRRLDLETDHQYL 101
A+A PA +G APA Q RP P P+ +PP +L
Sbjct: 2 AAAEPASSGQQAPAG-----------QGQGQRPPPQPPQAQAPQPPPPPQLG-------- 42
Query: 102 AESSGPARGRGRHPGKGVKSPGEKSRYETSLNLTTKRFLELLSHSADGVVDLNWAAEVLK 161
G G G SR+E SL L T +F+ LL + DGV+DL AA+ L
Sbjct: 43 --------------GAG----GGSSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLA 84
Query: 162 V-QKRRIYDITNVLEGIQLIAKKSKNHIQWLG---SHTTVGVGGRLEGLTQDLRQLQESE 217
V QKRRIYDITNVLEGI LI KKSKN IQW G T V RL L ++ L+ E
Sbjct: 85 VRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKE 144
Query: 218 QQLDHLMNICTTQLRLLSEDTDSQRLAYVTCQDLRSIADPAEQMVMVIKAPPETQLQ--- 274
++LD ++ + +D+ + R +YVT +D+ + + ++ I+AP TQL+
Sbjct: 145 RELDQQKLWLQQSIKNVMDDSINNRFSYVTHEDICNCFN--GDTLLAIQAPSGTQLEVPI 202
Query: 275 ---AVDSSENFQISLKSKQGPIDVFLCPEETVGGISPGKTPSQEVTSEEENRATDSATIV 331
+ + +QI+LKS GPI V L +E ++ S +V
Sbjct: 203 PEMGQNGQKKYQINLKSHSGPIHVLLINKE----------------------SSSSKPVV 240
Query: 332 SPPPSSPPSSLTTDPSQSLL------------SLEQEPLLSRMGSLRAPVDEDRLSPLVA 379
P P PP LT SQSL +L ++ + R +L+ D S ++
Sbjct: 241 FPVP--PPDDLTQPSSQSLTPVTPQKSSMATQNLPEQHVSERSQALQQTSATDISSGSIS 298
Query: 380 ADSLLEHVREDFSGLLPEEFISLSPPHEALDYHFGLEEGEGIRDLFD 426
D + E + D LL LSP A DY+F L++ EG+ DLFD
Sbjct: 299 GDIIDELMSSDVFPLL-----RLSPT-PADDYNFNLDDNEGVCDLFD 339
>gi|134142811 E2F transcription factor 5 isoform 1 [Homo sapiens]
Length = 346
Score = 144 bits (363), Expect = 2e-34
Identities = 130/404 (32%), Positives = 180/404 (44%), Gaps = 84/404 (20%)
Query: 42 ASAPPAPTGPAAPAAGPCDPDLLLFATPQAPRPTPSAPRPALGRPPVKRRLDLETDHQYL 101
A+A PA +G APA Q RP P P+ +PP +L
Sbjct: 2 AAAEPASSGQQAPAG-----------QGQGQRPPPQPPQAQAPQPPPPPQLG-------- 42
Query: 102 AESSGPARGRGRHPGKGVKSPGEKSRYETSLNLTTKRFLELLSHSADGVVDLNWAAEVLK 161
G G G SR+E SL L T +F+ LL + DGV+DL AA+ L
Sbjct: 43 --------------GAG----GGSSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLA 84
Query: 162 V-QKRRIYDITNVLEGIQLIAKKSKNHIQWLG---SHTTVGVGGRLEGLTQDLRQLQESE 217
V QKRRIYDITNVLEGI LI KKSKN IQW G T V RL L ++ L+ E
Sbjct: 85 VRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKE 144
Query: 218 QQLDHLMNICTTQLRLLSEDTDSQRLAYVTCQDLRSIADPAEQMVMVIKAPPETQLQ--- 274
++LD ++ + +D+ + R +YVT +D+ + + ++ I+AP TQL+
Sbjct: 145 RELDQQKLWLQQSIKNVMDDSINNRFSYVTHEDICNCFN--GDTLLAIQAPSGTQLEVPI 202
Query: 275 ---AVDSSENFQISLKSKQGPIDVFLCPEETVGGISPGKTPSQEVTSEEENRATDSATIV 331
+ + +QI+LKS GPI V L +E ++ S +V
Sbjct: 203 PEMGQNGQKKYQINLKSHSGPIHVLLINKE----------------------SSSSKPVV 240
Query: 332 SPPPSSPPSSLTTDPSQSLLSLEQEPLLSRMGSLRAPVD--EDRLSPLVAADSLLEHVRE 389
P P PP LT SQSL + P S M + P +R L +
Sbjct: 241 FPVP--PPDDLTQPSSQSLTPV--TPQKSSMATQNLPEQHVSERSQALQQTSATDISSAG 296
Query: 390 DFSGLLPEEFISLS-------PPHEALDYHFGLEEGEGIRDLFD 426
SG + +E +S P A DY+F L++ EG+ DLFD
Sbjct: 297 SISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEGVCDLFD 340
>gi|12669915 E2F transcription factor 4 [Homo sapiens]
Length = 413
Score = 137 bits (345), Expect = 2e-32
Identities = 129/398 (32%), Positives = 172/398 (43%), Gaps = 95/398 (23%)
Query: 122 PGEKSRYETSLNLTTKRFLELLSHSADGVVDLNWAAEVLKV-QKRRIYDITNVLEGIQLI 180
PG SR+E SL L T +F+ LL + DGV+DL AA+ L V QKRRIYDITNVLEGI LI
Sbjct: 12 PGTPSRHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQKRRIYDITNVLEGIGLI 71
Query: 181 AKKSKNHIQWLG---SHTTVGVGGRLEGLTQDLRQLQESEQQLDHLMNICTTQLRLLSED 237
KKSKN IQW G T + +L L ++ +LQ+ EQ+LD +R ++ED
Sbjct: 72 EKKSKNSIQWKGVGPGCNTREIADKLIELKAEIEELQQREQELDQHKVWVQQSIRNVTED 131
Query: 238 TDSQRLAYVTCQDLRSIADPAEQMVMVIKAPPETQL-----QAVDSSENFQISLKSKQGP 292
+ LAYVT +D+ A ++ I+AP T L + ++ + +QI LKS GP
Sbjct: 132 VQNSCLAYVTHEDICRCF--AGDTLLAIRAPSGTSLEVPIPEGLNGQKKYQIHLKSVSGP 189
Query: 293 IDVFLC----------------PEETVGGISPGKTP----------SQEVTSEEENRATD 326
I+V L PE+ + S TP SQE + + T
Sbjct: 190 IEVLLVNKEAWSSPPVAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLTP 249
Query: 327 SAT----------------IVSPPPSSP-------------PSSLTTDPSQSLLSLEQEP 357
+A VS P + P++L T P QS L+
Sbjct: 250 TAVPGSAEVQGMAGPAAEITVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSS 309
Query: 358 LLSRMGSLRA-----------------PVDEDRLSPLVAADSLLE---HVREDFSGLLPE 397
S S + P+ D L L E RE S L E
Sbjct: 310 SSSSSSSSSSNSNSSSSSGPNPSTSFEPIKADPTGVLELPKELSEIFDPTRECMSSELLE 369
Query: 398 EFIS---------LSPPHEALDYHFGLEEGEGIRDLFD 426
E +S LSPP DY + L+E EG+ DLFD
Sbjct: 370 ELMSSEVFAPLLRLSPPPGDHDYIYNLDESEGVCDLFD 407
>gi|134142813 E2F transcription factor 5 isoform 3 [Homo sapiens]
Length = 185
Score = 56.2 bits (134), Expect = 6e-08
Identities = 57/206 (27%), Positives = 88/206 (42%), Gaps = 43/206 (20%)
Query: 236 EDTDSQRLAYVTCQDLRSIADPAEQMVMVIKAPPETQLQAV------DSSENFQISLKSK 289
+D+ + R +YVT +D+ + + ++ I+AP TQL+ + + +QI+LKS
Sbjct: 2 DDSINNRFSYVTHEDICNCFNG--DTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSH 59
Query: 290 QGPIDVFLCPEETVGGISPGKTPSQEVTSEEENRATDSATIVSPPPSSPPSSLTTDPSQS 349
GPI V L +E+ + S +V P P PP LT SQS
Sbjct: 60 SGPIHVLLINKES----------------------SSSKPVVFPVP--PPDDLTQPSSQS 95
Query: 350 LLSLEQEPLLSRMGSLRAPVDE--DRLSPLVAADSLLEHVREDFSGLLPEEFISLS---- 403
L + P S M + P +R L + SG + +E +S
Sbjct: 96 LTPVT--PQKSSMATQNLPEQHVSERSQALQQTSATDISSAGSISGDIIDELMSSDVFPL 153
Query: 404 ---PPHEALDYHFGLEEGEGIRDLFD 426
P A DY+F L++ EG+ DLFD
Sbjct: 154 LRLSPTPADDYNFNLDDNEGVCDLFD 179
>gi|38505226 E2F family member 8 [Homo sapiens]
Length = 867
Score = 55.1 bits (131), Expect = 1e-07
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 12/112 (10%)
Query: 124 EKSRYETSLNLTTKRFLELLSHSADGVVD----LNWAAEVLKVQKRRIYDITNVLEGIQL 179
+ SR E SL L +FL + + V+ L+ AE L V++RRIYDI NVLE + +
Sbjct: 110 QPSRKEKSLGLLCHKFLARYPNYPNPAVNNDICLDEVAEELNVERRRIYDIVNVLESLHM 169
Query: 180 IAKKSKNHIQWLGSHTTVGVGGRLEGLTQD--------LRQLQESEQQLDHL 223
+++ +KN W G H G L+ + ++ + + +E EQ+ D +
Sbjct: 170 VSRLAKNRYTWHGRHNLNKTLGTLKSIGEENKYAEQIMMIKKKEYEQEFDFI 221
Score = 40.0 bits (92), Expect = 0.004
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 14/82 (17%)
Query: 115 PGKGVKSPGEKSRYETSLNLTTKRFLELLSHSADGVVDLNWAAEVL-------------- 160
PG ++ SR + SL + +++F+ L S +V L AA++L
Sbjct: 249 PGVEFRAASVNSRKDKSLRVMSQKFVMLFLVSTPQIVSLEVAAKILIGEDHVEDLDKSKF 308
Query: 161 KVQKRRIYDITNVLEGIQLIAK 182
K + RR+YDI NVL + LI K
Sbjct: 309 KTKIRRLYDIANVLSSLDLIKK 330
>gi|145580626 E2F transcription factor 7 [Homo sapiens]
Length = 911
Score = 50.4 bits (119), Expect = 3e-06
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 8/102 (7%)
Query: 126 SRYETSLNLTTKRFLELLSH----SADGVVDLNWAAEVLKVQKRRIYDITNVLEGIQLIA 181
SR + SL L ++FL + + L+ A L V++RRIYDI NVLE + L++
Sbjct: 141 SRKQKSLGLLCQKFLARYPSYPLSTEKTTISLDEVAVSLGVERRRIYDIVNVLESLHLVS 200
Query: 182 KKSKNHIQWLGSHTTVGVGGRLEGLTQDLRQLQESEQQLDHL 223
+ +KN W G H+ L+ L ++ Q+ E+Q+ +L
Sbjct: 201 RVAKNQYGWHGRHSLPKTLRNLQRLGEE----QKYEEQMAYL 238
Score = 37.7 bits (86), Expect = 0.021
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 13/75 (17%)
Query: 121 SPGEKSRYETSLNLTTKRFLELLSHSADGVVDLNWAAEVL-------------KVQKRRI 167
S SR + SL + +++F+ L S +V L+ AA++L K + RR+
Sbjct: 276 SSSANSRKDKSLRIMSQKFVMLFLVSKTKIVTLDVAAKILIEESQDAPDHSKFKTKVRRL 335
Query: 168 YDITNVLEGIQLIAK 182
YDI NVL + LI K
Sbjct: 336 YDIANVLTSLALIKK 350
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 41.2 bits (95), Expect = 0.002
Identities = 39/158 (24%), Positives = 64/158 (40%), Gaps = 20/158 (12%)
Query: 4 AGAPAGGPC-APALEALLGAGALRLLDSSQIVIISAAQDASAPPAP------------TG 50
+ APA P P L ++ ++ +L S+ I I+++A +++ P P T
Sbjct: 1831 SSAPASAPAPTPILASVSTPASVTILASASIPILASALASTSAPTPAPAASSPAAPVITA 1890
Query: 51 PAAPAAGPCDPDLLLFATPQAPRPTP---SAPRPALGRPPVKRRLDLETDHQYLAESSGP 107
P PA+ P L A+ AP P P SAP PA PP + +T H+ +
Sbjct: 1891 PTIPASAPTASVPLAPASASAPAPAPTPVSAPNPA---PPAPAQTQAQT-HKPVQNPLQT 1946
Query: 108 ARGRGRHPGKGVKSPGEKSRYETSLNLTTKRFLELLSH 145
+ P ++ P ++ T + K SH
Sbjct: 1947 TSQSSKQPPPSIRLPSAQTPNGTDYVASGKSIQTPQSH 1984
>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
sapiens]
Length = 288
Score = 40.0 bits (92), Expect = 0.004
Identities = 28/80 (35%), Positives = 31/80 (38%)
Query: 7 PAGGPCAPALEALLGAGALRLLDSSQIVIISAAQDASAPPAPTGPAAPAAGPCDPDLLLF 66
PA GP A AL A+ A A S AA A+A PA PAA G P
Sbjct: 152 PAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAGPSAASL 211
Query: 67 ATPQAPRPTPSAPRPALGRP 86
P P+A PA P
Sbjct: 212 CAASQPAAVPAAASPAAAAP 231
Score = 30.8 bits (68), Expect = 2.5
Identities = 24/59 (40%), Positives = 27/59 (45%), Gaps = 8/59 (13%)
Query: 37 SAAQDASAPPAPTGPAAPAAGPC----DPDL--LLFATPQA--PRPTPSAPRPALGRPP 87
+AA A PPA PAA A C DP L A+P A P P+A RP PP
Sbjct: 99 AAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPP 157
Score = 30.0 bits (66), Expect = 4.3
Identities = 26/82 (31%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
Query: 4 AGAPAGGPCAPALEALLGAGALRLLDSSQIVIISAAQDASAPPAPTGPAA------PAAG 57
AG PA P A A + A S + +A A PPA PAA PAA
Sbjct: 110 AGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPPAAALAAVYPAAA 169
Query: 58 PCDPDLLLFATPQAPRPTPSAP 79
L A+P A P ++P
Sbjct: 170 DPSAASLCAASPLAAVPAAASP 191
>gi|24308458 Lix1 homolog (mouse) like [Homo sapiens]
Length = 337
Score = 40.0 bits (92), Expect = 0.004
Identities = 26/69 (37%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 21 GAGALRLLDSSQIVIISAAQDASAPPAPTGPAAPAAGPCDPDLLLFATPQAPRPTPSAPR 80
G G LR L + AA + PPA PA P P P LLL P P P +A
Sbjct: 17 GRGTLRALRPG---VTGAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGS 73
Query: 81 PALGRPPVK 89
PA+ R V+
Sbjct: 74 PAVLREAVE 82
>gi|148806884 AKT1 substrate 1 (proline-rich) [Homo sapiens]
Length = 256
Score = 40.0 bits (92), Expect = 0.004
Identities = 35/102 (34%), Positives = 40/102 (39%), Gaps = 21/102 (20%)
Query: 7 PAGGPCAPALEA--LLGAGALRLLDSSQIVIISAAQDASAPPAPTGPAAPAAGPCDPDLL 64
P GPCA A L A R L I + A A+ PPAP PA
Sbjct: 39 PRPGPCAYAAHGRGALAEAARRCLHD--IALAHRAATAARPPAPP----PA--------- 83
Query: 65 LFATPQAPRPTPSAPRPALGRPPVKRRLDLETDHQYLAESSG 106
PQ P PTPS PRP L R + D T+ + E G
Sbjct: 84 ----PQPPSPTPSPPRPTLAREDNEEDEDEPTETETSGEQLG 121
>gi|148806906 AKT1 substrate 1 (proline-rich) [Homo sapiens]
Length = 256
Score = 40.0 bits (92), Expect = 0.004
Identities = 35/102 (34%), Positives = 40/102 (39%), Gaps = 21/102 (20%)
Query: 7 PAGGPCAPALEA--LLGAGALRLLDSSQIVIISAAQDASAPPAPTGPAAPAAGPCDPDLL 64
P GPCA A L A R L I + A A+ PPAP PA
Sbjct: 39 PRPGPCAYAAHGRGALAEAARRCLHD--IALAHRAATAARPPAPP----PA--------- 83
Query: 65 LFATPQAPRPTPSAPRPALGRPPVKRRLDLETDHQYLAESSG 106
PQ P PTPS PRP L R + D T+ + E G
Sbjct: 84 ----PQPPSPTPSPPRPTLAREDNEEDEDEPTETETSGEQLG 121
>gi|148806896 AKT1 substrate 1 (proline-rich) [Homo sapiens]
Length = 256
Score = 40.0 bits (92), Expect = 0.004
Identities = 35/102 (34%), Positives = 40/102 (39%), Gaps = 21/102 (20%)
Query: 7 PAGGPCAPALEA--LLGAGALRLLDSSQIVIISAAQDASAPPAPTGPAAPAAGPCDPDLL 64
P GPCA A L A R L I + A A+ PPAP PA
Sbjct: 39 PRPGPCAYAAHGRGALAEAARRCLHD--IALAHRAATAARPPAPP----PA--------- 83
Query: 65 LFATPQAPRPTPSAPRPALGRPPVKRRLDLETDHQYLAESSG 106
PQ P PTPS PRP L R + D T+ + E G
Sbjct: 84 ----PQPPSPTPSPPRPTLAREDNEEDEDEPTETETSGEQLG 121
>gi|6005900 transcription factor Dp-1 [Homo sapiens]
Length = 410
Score = 39.7 bits (91), Expect = 0.005
Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 17/127 (13%)
Query: 104 SSGPARGRGRHPGKGVKSPGEK------SRYETSLNLTTKRFLELLSHSADGVVDLNWAA 157
S+G +G GKG++ K + TS N + S +AD + N +A
Sbjct: 101 SAGKRNRKGEKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVAEFS-AADNHILPNESA 159
Query: 158 EVLKVQKRRIYDITNVLEGIQLIAKKSKNHIQWLGSHTT---------VGVGGRLEGLTQ 208
K +RR+YD NVL + +I+K+ K I+W+G T V RLE + Q
Sbjct: 160 YDQKNIRRRVYDALNVLMAMNIISKE-KKEIKWIGLPTNSAQECQNLEVERQRRLERIKQ 218
Query: 209 DLRQLQE 215
QLQE
Sbjct: 219 KQSQLQE 225
>gi|153791839 sodium channel associated protein 1 [Homo sapiens]
Length = 688
Score = 39.7 bits (91), Expect = 0.005
Identities = 42/175 (24%), Positives = 79/175 (45%), Gaps = 25/175 (14%)
Query: 131 SLNLTTKRFLELLSHSADGVVDLNWAAEVLKVQKR----RIYDITNVLEGIQLIAKKSKN 186
++ +T ++FL+ ++ + + L K++ R ++ ++TNV E +Q KK +
Sbjct: 202 NMEVTNQQFLKTVTEQSVIIEQLRKKLRQAKLELRVAVAKVEELTNVTEDLQGQMKKKEK 261
Query: 187 HIQWLGSHTTVGVGGRLEGLTQDLRQLQESEQQLDHLMNICTT-----QLRLLSEDTDSQ 241
+ V GR E + L+QLQ S +QL+ + +C T QLR + + Q
Sbjct: 262 DV--------VSAHGREEASDRRLQQLQSSIKQLE--IRLCVTIQEANQLRTENTHLEKQ 311
Query: 242 -RLAYVTCQDLRSIADPAEQMVMVIKAPPETQLQAVDSSENFQISLKSKQGPIDV 295
R C +L + E+ +++A QL + + Q L+ KQ D+
Sbjct: 312 TRELQAKCNELEN-----ERYEAIVRARNSMQLLEEANLQKSQALLEEKQKEEDI 361
>gi|21359935 Down syndrome cell adhesion molecule like 1 [Homo
sapiens]
Length = 2113
Score = 39.3 bits (90), Expect = 0.007
Identities = 27/78 (34%), Positives = 30/78 (38%), Gaps = 8/78 (10%)
Query: 44 APPAPTGPAAPAAGPCDPDLLLFATPQAPRPTPSAPRPALGRPPVKRRLDLETDHQYLAE 103
APPA T P AP P +P P A P PS P G P K + L E
Sbjct: 2038 APPAGTAPPAPGPTPAEPP----TAPSAAPPAPSTEPPRAGGPHTK----MGGSRDSLLE 2089
Query: 104 SSGPARGRGRHPGKGVKS 121
S GR + G G S
Sbjct: 2090 MSTSGVGRSQKQGAGAYS 2107
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 39.3 bits (90), Expect = 0.007
Identities = 33/94 (35%), Positives = 39/94 (41%), Gaps = 20/94 (21%)
Query: 42 ASAPPA--PTGPAAPAAGP----CDPDLLLFATPQAPRPT------PSAPRPALGRPPVK 89
+SAPPA PT A P +GP P + A P AP PT P+ P A G PP
Sbjct: 129 SSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPP 188
Query: 90 RRLDLETDHQYLAESSGPARGRGRHPGKGVKSPG 123
+ GP +G G KG K PG
Sbjct: 189 AAVP--------GPGPGPKQGPGPGGPKGGKMPG 214
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 38.5 bits (88), Expect = 0.012
Identities = 51/178 (28%), Positives = 59/178 (33%), Gaps = 32/178 (17%)
Query: 4 AGAPAGGPCAPALEALLGAG-----ALRLLDSSQIVIISAAQDASAPPAPTGPAAPAA-- 56
AGA GP APA E GA A R P P GPA PAA
Sbjct: 68 AGAAGAGPAAPA-EGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKL 126
Query: 57 --------GPCDPDLLLFATPQAPRPTPSAPRPALGRPPVKRRLDLETDHQYLAESSGPA 108
G C P A P P P+ P G LA +GP
Sbjct: 127 RPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAA-------------LAARAGPG 173
Query: 109 RGRGRHPGKGVKSPGEKSRYETSLNLTTKRFLELLSHSADGVVDL--NWAAEVLKVQK 164
G G PG G PG+ + + L L H+A V L N A +L + K
Sbjct: 174 PGPGPGPGPG-PGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPK 230
Score = 36.2 bits (82), Expect = 0.060
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 4 AGAPAGGPCAPALEALLGAGALRLLDSSQIVIISAAQDASAPPAPTGPAAPAAGPCDPDL 63
AG PAG P A A A + S ++ AA A+ A +GPA+ AA +
Sbjct: 319 AGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAA-----SM 373
Query: 64 LLFATPQAPRPTPSA-PRPALGRP 86
++ T Q P+P+A P PA G P
Sbjct: 374 VIGPTMQGALPSPAAVPPPAPGTP 397
Score = 35.0 bits (79), Expect = 0.13
Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 13/49 (26%)
Query: 42 ASAPPAPTGPAAPAAGPCDPDLLLFATPQAPRPTPSAPRPA---LGRPP 87
A+APPAP P+ PAA P AP P P PA L RPP
Sbjct: 246 AAAPPAPAAPSPPAA----------PAPAAPAAAPPPPPPAPATLARPP 284
Score = 32.0 bits (71), Expect = 1.1
Identities = 30/95 (31%), Positives = 38/95 (40%), Gaps = 8/95 (8%)
Query: 39 AQDASAPPAPTGPAAPAAGPCDP---DLLLFATPQAPRPTPSAPRPALGRPPVKRRLDLE 95
A A +PPA PAAPAA P P L P P P+A PA+ P +
Sbjct: 251 APAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTA-APAVPPPAAAQNGGSA 309
Query: 96 TDHQYLAESSGPARGRGRHPGKG----VKSPGEKS 126
A ++G G PG G +PG K+
Sbjct: 310 GAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKA 344
Score = 29.6 bits (65), Expect = 5.6
Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 10/59 (16%)
Query: 38 AAQDASAPPAPTGPAAPAAGPCDPDLLLFATPQAPRPTPS----------APRPALGRP 86
AA A+ PP P PA A P P A P P P + AP PA G P
Sbjct: 264 AAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGP 322
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 38.5 bits (88), Expect = 0.012
Identities = 27/77 (35%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 40 QDASAPPAPTGPAAPAAGPCDPDLLLFATPQAPRPTPSAPRP-ALGRPPVKRRLDLETDH 98
Q SAPP P P+ P L PQAP P P A P ALGRPP ++ +
Sbjct: 668 QQGSAPPTPVPPSPPQ----PVTLGAVPAPQAPPPPPKALYPGALGRPPPMPPMNFDPRW 723
Query: 99 QYLAESSGPARGRGRHP 115
+ P +GR P
Sbjct: 724 MMIPPYVDPRLLQGRPP 740
Score = 34.7 bits (78), Expect = 0.18
Identities = 39/132 (29%), Positives = 54/132 (40%), Gaps = 16/132 (12%)
Query: 7 PAGGPCAPALEALLGAGALRLLDSSQIVIISAAQDASAPPAPTGPAAPAAGPC-DPDLLL 65
P+G P L L ++DS V+ + + PPAP + GP P L
Sbjct: 1971 PSGAPAQQML--------LPMVDSQLPVVNFGSLPPAPPPAPPPLSLLPVGPALQPPSLA 2022
Query: 66 FATPQAPR----PTPSAPRPA-LGRPPVKR-RLDLETDHQYLAESSGPARGRGRHPGKGV 119
P AP P+P+ P PA LGR + L D+Q L+ + G G R P G
Sbjct: 2023 VRPPPAPATRVLPSPARPFPASLGRAELHPVELKPFQDYQKLSSNLG-GPGSSRTPPTGR 2081
Query: 120 KSPGEKSRYETS 131
G SR + +
Sbjct: 2082 SFSGLNSRLKAT 2093
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 37.7 bits (86), Expect = 0.021
Identities = 19/39 (48%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 45 PPAPTGPAAPAA-GPCDPDLLLFATPQAPRPTPSAPRPA 82
PP P GP P GP P L L P P P P AP PA
Sbjct: 316 PPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPA 354
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 37.7 bits (86), Expect = 0.021
Identities = 30/98 (30%), Positives = 40/98 (40%), Gaps = 14/98 (14%)
Query: 3 LAGAPAGGPCAPALEALLGAGALRLLDSSQIVIISAAQDASAPPAPTGPAAPAAGPCDPD 62
L AP P +P ++A A + S A +APP P+ PA+ P P
Sbjct: 435 LLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPS 494
Query: 63 LLLFATPQAP-----------RPTPSAPRPALGRPPVK 89
PQAP +P P AP PAL PP++
Sbjct: 495 AT--PPPQAPPPLAAPPLQLAKPPPQAP-PALATPPLQ 529
Score = 31.2 bits (69), Expect = 1.9
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 1/86 (1%)
Query: 2 ALAGAPAGGPCAPALEALLGAGALRLLDSSQIVIISAAQDASAPPAPTGPAAPAAGPCDP 61
ALA P P +P L A + + + Q +PP AP + P P
Sbjct: 399 ALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASP 458
Query: 62 DLLLFATPQAPRPTPSAPRPALGRPP 87
+ ATP + P PS P L PP
Sbjct: 459 PVSPSATPPSQAP-PSLAAPPLQVPP 483
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 37.7 bits (86), Expect = 0.021
Identities = 30/98 (30%), Positives = 40/98 (40%), Gaps = 14/98 (14%)
Query: 3 LAGAPAGGPCAPALEALLGAGALRLLDSSQIVIISAAQDASAPPAPTGPAAPAAGPCDPD 62
L AP P +P ++A A + S A +APP P+ PA+ P P
Sbjct: 396 LLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPS 455
Query: 63 LLLFATPQAP-----------RPTPSAPRPALGRPPVK 89
PQAP +P P AP PAL PP++
Sbjct: 456 AT--PPPQAPPPLAAPPLQLAKPPPQAP-PALATPPLQ 490
Score = 32.3 bits (72), Expect = 0.87
Identities = 23/49 (46%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 42 ASAPPAPTGP---AAPAAGPCDPDLLLFATPQAPRPTPSAPRPALGRPP 87
A PP T P AAPA GP L +P AP P+PSAP P+L P
Sbjct: 270 ALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAP-PSPSAP-PSLQTLP 316
Score = 31.2 bits (69), Expect = 1.9
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 1/86 (1%)
Query: 2 ALAGAPAGGPCAPALEALLGAGALRLLDSSQIVIISAAQDASAPPAPTGPAAPAAGPCDP 61
ALA P P +P L A + + + Q +PP AP + P P
Sbjct: 360 ALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASP 419
Query: 62 DLLLFATPQAPRPTPSAPRPALGRPP 87
+ ATP + P PS P L PP
Sbjct: 420 PVSPSATPPSQAP-PSLAAPPLQVPP 444
>gi|34452705 bromodomain containing 8 isoform 1 [Homo sapiens]
Length = 951
Score = 37.7 bits (86), Expect = 0.021
Identities = 45/179 (25%), Positives = 67/179 (37%), Gaps = 27/179 (15%)
Query: 209 DLRQLQESEQQLDHLMNICTTQLRLLSEDTDSQRLAYVTCQDLRSIADPAEQMVMVIKAP 268
+L Q + +LD L N T+ +L E+ + +R A D A Q +K P
Sbjct: 127 ELIQAGHMDSRLDELCNDIATKKKLEEEEAEVKRKA----------TDAAYQARQAVKTP 176
Query: 269 PETQLQAVDSSENFQISLKSKQGPIDVFLCP---EETVGGISPGKTPSQEVTSEEENRAT 325
P +L V + P+ L P EE G++PG PS VTS
Sbjct: 177 PR-RLPTVMVRSPIDSASPGGDYPLGD-LTPTTMEEATSGVTPGTLPSTPVTS------- 227
Query: 326 DSATIVSPPPSSPPSSLTTDPSQSLLSLEQEPLLSRMGSLRAPVDEDRLSPLVAADSLL 384
P + PP S + + ++ + P +G P LS L+ SLL
Sbjct: 228 ----FPGIPDTLPPGSAPLEAPMTPVT-DDSPQKKMLGQKATPPPSPLLSELLKKGSLL 281
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 37.0 bits (84), Expect = 0.035
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Query: 35 IISAAQDASAPPAPTGPAAPAAGPCDPDLLLFATPQAPRPTPSAPRPALGRPPVKRRLDL 94
+I +D S PPA PA P++ P P P +P PTP R V + DL
Sbjct: 1008 VIQKLEDVSKPPAYAYPATPSSHPTSP------PPASPPPTPGITRKEEAPENVVEKKDL 1061
Query: 95 ETDHQ 99
E + +
Sbjct: 1062 ELEKE 1066
Score = 30.0 bits (66), Expect = 4.3
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
Query: 42 ASAPPA--PTGPAAPAAGPCDPDLLLFATPQAPRPTPSAPRPALGRPPVKRRLDLETDHQ 99
A+A P P P AAGP + P +PR +P A AL +++ D+
Sbjct: 964 ATAGPGLLPRKPPGLAAGPAGTYGKAVSPPPSPRASPVA---ALKAKVIQKLEDVSKPPA 1020
Query: 100 YLAESSGPARGRGRHPGKGVKSPGEKSRYETSLNLTTKRFLEL 142
Y ++ + P +PG + E N+ K+ LEL
Sbjct: 1021 YAYPATPSSHPTSPPPASPPPTPGITRKEEAPENVVEKKDLEL 1063
Score = 29.3 bits (64), Expect = 7.4
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 14/84 (16%)
Query: 38 AAQDASAPPAPTGPAAPAAGPCDPDLLLFATPQAPRPTPSA-------PRPALGRPPVKR 90
++ D +AP GP+A AA P AT QA + PSA P P PP +
Sbjct: 2680 SSDDEAAPAPTAGPSAQAALPTK------ATKQAGKARPSAHSPGKKTPAPQPQAPPPQP 2733
Query: 91 RLDLETDHQYLAESSGPARGRGRH 114
L+ Q A+S P + G H
Sbjct: 2734 TQPLQPKAQAGAKSR-PKKREGVH 2756
>gi|122937271 WAS protein homolog associated with actin, golgi
membranes and microtubules [Homo sapiens]
Length = 809
Score = 37.0 bits (84), Expect = 0.035
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 20/109 (18%)
Query: 333 PPPSSPPSSLTTDPSQSLLSLEQEPLLSRMGSLRAPVDEDRLSPLV-------------- 378
PPP PP P ++L S Q +G RAPV +D+ PLV
Sbjct: 645 PPPPPPPPPPPPPPLRALSSSSQAATHQNLG-FRAPVKDDQPRPLVCESPAERPRDSLES 703
Query: 379 -----AADSLLEHVREDFSGLLPEEFISLSPPHEALDYHFGLEEGEGIR 422
+ D +L +R + L E ++ PPH +++ H +G++
Sbjct: 704 FSCPGSMDEVLASLRHGRAPLRKVEVPAVRPPHASINEHILAAIRQGVK 752
>gi|73476377 LBXCOR1 homolog [Homo sapiens]
Length = 921
Score = 36.6 bits (83), Expect = 0.046
Identities = 44/143 (30%), Positives = 57/143 (39%), Gaps = 16/143 (11%)
Query: 2 ALAGAPAGGPCAPALEALLGAGALRLLDSSQIVIISAAQDASAPPAPTGPAAPAAGPCDP 61
A A A A A A A G+GA LD ++ A+++ P+A + GP D
Sbjct: 466 AKAVAAAVAAAAAAAAAAAGSGAPEPLDGAE-----PAKESGLGAEERCPSALSRGPLDE 520
Query: 62 DLL--LFATPQAPRPTPSAPRPALG------RPPVKRRLDLETDHQYLAES--SGPARGR 111
D P AP P P P G RP VK + + E+ +GPARG
Sbjct: 521 DGTDEALPPPLAPLPPPPPPPARKGSYVSAFRPVVKDTESIAKLYGSAREAYGAGPARGP 580
Query: 112 GRHPGK-GVKSPGEKSRYETSLN 133
G G G SP S +S N
Sbjct: 581 GPGAGSGGYVSPDFLSEGSSSYN 603
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 36.6 bits (83), Expect = 0.046
Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 12/87 (13%)
Query: 4 AGAPAGGPCAPALEALLGAGALRLLDSSQIVIISAAQDASAPPAPTGPAAPAAGPCDPDL 63
AGAP P A GA RL +S + +S AQ +S P P+ P +P
Sbjct: 2145 AGAPLEIPVARL-------GARRLQESPSLSALSEAQPSS-PARPSAPKPSTPKSAEPS- 2195
Query: 64 LLFATPQAPRPTPSAPRPALGRPPVKR 90
AT + P P AP+PA + P R
Sbjct: 2196 ---ATTPSDAPQPPAPQPAQDKAPEPR 2219
Score = 30.4 bits (67), Expect = 3.3
Identities = 31/108 (28%), Positives = 43/108 (39%), Gaps = 9/108 (8%)
Query: 247 TCQDLRSIADPAEQMVMVIKAPPETQLQAVDSSENFQISLKSKQGPIDVFLCPEET--VG 304
T Q S +P E + + P+T +AV + S S + P D P G
Sbjct: 520 TLQRAPSPREPGEPPLFSRPSTPKTS-RAVSPAAAQPPSPSSAEKPGDEPGRPRSRGPAG 578
Query: 305 GISPGKTPSQEVTSEEENRATDSATI------VSPPPSSPPSSLTTDP 346
PG+ P QEV ++ T S I V PP + PP + T P
Sbjct: 579 RTEPGEGPQQEVRRRDQFPLTRSRAIQECRSPVPPPAADPPEARTKAP 626
Score = 30.0 bits (66), Expect = 4.3
Identities = 32/86 (37%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 4 AGAPAGGPCAPALEALLGAGALRLLDSSQIVIISAAQDASAPPAPTGPAAPAAGPCDPDL 63
A PA P AL+ L AL L +QI I S A GPAAP + P P
Sbjct: 2225 ASKPAPPP--QALQTL----ALPLTPYAQI-IQSLQLSGHAQGPSQGPAAPPSEP-KPHA 2276
Query: 64 LLFATPQAPRP-TPSAPRPALGRPPV 88
+FA +P P P P+ G PPV
Sbjct: 2277 AVFARVASPPPGAPEKRVPSAGGPPV 2302
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.132 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,844,358
Number of Sequences: 37866
Number of extensions: 1132269
Number of successful extensions: 8934
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 416
Number of HSP's that attempted gapping in prelim test: 7356
Number of HSP's gapped (non-prelim): 1773
length of query: 437
length of database: 18,247,518
effective HSP length: 105
effective length of query: 332
effective length of database: 14,271,588
effective search space: 4738167216
effective search space used: 4738167216
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.