Guide to the Human Genome
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Name: LIX1L Sequence: fasta or formatted (337aa) NCBI GI: 24308458
Description:

Lix1 homolog (mouse) like

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.6         39           4
 C cysteine            1.5          5           1
 D aspartate           2.7          9           3
 E glutamate           7.4         25           2
 F phenylalanine       3.9         13           1
 G glycine             8.0         27           2
 H histidine           2.4          8           1
 I isoleucine          1.8          6           1
 K lysine              3.9         13           2
 L leucine             9.5         32           3
 M methionine          3.3         11           1
 N asparagine          3.9         13           1
 P proline             8.6         29           5
 Q glutamine           4.2         14           1
 R arginine            7.4         25           2
 S serine              7.7         26           2
 T threonine           3.9         13           1
 V valine              6.2         21           2
 W tryptophan          0.9          3           1
 Y tyrosine            1.5          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Lix1 homolog (mouse) like 
LIX1                  0.414   limb expression 1 
RANBP9                0.043   RAN binding protein 9 
PCLO                  0.040   piccolo isoform 2 
PCLO                  0.040   piccolo isoform 1 
FOXK1                 0.038   forkhead box K1 
ENAH                  0.037   enabled homolog isoform a 
ENAH                  0.037   enabled homolog isoform b 
FMNL2                 0.037   formin-like 2 
EVL                   0.037   Enah/Vasp-like 
WASF2                 0.035   WAS protein family, member 2 
RAPH1                 0.035   Ras association and pleckstrin homology domains 1 is...
DIAPH1                0.035   diaphanous 1 isoform 2 
DIAPH1                0.035   diaphanous 1 isoform 1 
WAS                   0.035   Wiskott-Aldrich syndrome protein 
SAMD1                 0.035   sterile alpha motif domain containing 1 
COL15A1               0.034   alpha 1 type XV collagen precursor 
R3HDM1                0.034   R3H domain containing 1 
C9orf75               0.034   hypothetical protein LOC286262 isoform 2 
C9orf75               0.034   hypothetical protein LOC286262 isoform 1 
DIDO1                 0.034   death inducer-obliterator 1 isoform c 
WTIP                  0.034   Wilms tumor 1 interacting protein 
LMTK3                 0.032   lemur tyrosine kinase 3 
SETD1A                0.032   SET domain containing 1A 
HCN2                  0.031   hyperpolarization activated cyclic nucleotide-gated...
RFX1                  0.031   regulatory factor X1 
FASLG                 0.031   fas ligand 
C6orf132              0.031   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.031   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.031   PREDICTED: hypothetical protein LOC647024 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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