Guide to the Human Genome
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Name: WWP1 Sequence: fasta or formatted (922aa) NCBI GI: 13654239
Description:

WW domain containing E3 ubiquitin protein ligase 1

Referenced in:

Ubiquitin and Related Protein Modifications
WW Domain

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         45           2
 C cysteine            1.6         15           2
 D aspartate           4.9         45           2
 E glutamate           8.1         75           2
 F phenylalanine       4.1         38           2
 G glycine             5.7         53           2
 H histidine           2.0         18           1
 I isoleucine          3.8         35           2
 K lysine              4.9         45           2
 L leucine             8.5         78           2
 M methionine          1.7         16           1
 N asparagine          6.1         56           2
 P proline             5.4         50           2
 Q glutamine           5.2         48           2
 R arginine            6.2         57           3
 S serine              7.7         71           5
 T threonine           8.0         74           3
 V valine              5.7         53           3
 W tryptophan          2.2         20           1
 Y tyrosine            3.3         30           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WW domain containing E3 ubiquitin protein ligase 1 [... 
ITCH                  0.562   itchy homolog E3 ubiquitin protein ligase 
WWP2                  0.559   WW domain containing E3 ubiquitin protein ligase 2 i...
WWP2                  0.392   WW domain containing E3 ubiquitin protein ligase 2 i...
NEDD4L                0.263   neural precursor cell expressed, developmentally do...
NEDD4L                0.263   neural precursor cell expressed, developmentally do...
NEDD4                 0.261   neural precursor cell expressed, developmentally do...
NEDD4                 0.261   neural precursor cell expressed, developmentally do...
NEDD4L                0.260   neural precursor cell expressed, developmentally do...
NEDD4L                0.260   neural precursor cell expressed, developmentally do...
NEDD4L                0.260   neural precursor cell expressed, developmentally do...
NEDD4L                0.260   neural precursor cell expressed, developmentally dow...
NEDD4L                0.260   neural precursor cell expressed, developmentally do...
NEDD4L                0.256   neural precursor cell expressed, developmentally do...
NEDD4L                0.256   neural precursor cell expressed, developmentally do...
SMURF2                0.239   SMAD specific E3 ubiquitin protein ligase 2 
SMURF1                0.228   Smad ubiquitination regulatory factor 1 isoform 2 [H...
SMURF1                0.225   Smad ubiquitination regulatory factor 1 isoform 1 [H...
HECW1                 0.189   NEDD4-like ubiquitin-protein ligase 1 
HECW2                 0.188   HECT, C2 and WW domain containing E3 ubiquitin prote...
HUWE1                 0.160   HECT, UBA and WWE domain containing 1 
HACE1                 0.136   HECT domain and ankyrin repeat containing, E3 ubiqu...
UBE3A                 0.094   ubiquitin protein ligase E3A isoform 3 
UBE3A                 0.094   ubiquitin protein ligase E3A isoform 1 
UBE3A                 0.094   ubiquitin protein ligase E3A isoform 2 
HECTD2                0.093   HECT domain containing 2 isoform a 
KIAA0317              0.084   hypothetical protein LOC9870 
UBE3B                 0.078   ubiquitin protein ligase E3B 
UBE3B                 0.078   ubiquitin protein ligase E3B 
UBE3C                 0.077   ubiquitin protein ligase E3C 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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