Search of human proteins with 42518074

Search of human proteins with 42518074

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|42518074 transcription factor 7 (T-cell specific, HMG-box)
isoform 3 [Homo sapiens]
         (269 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|42518074 transcription factor 7 (T-cell specific, HMG-box) is...   561   e-160
gi|198442849 transcription factor 7 (T-cell specific, HMG-box) 5...   513   e-146
gi|42714657 transcription factor 7 (T-cell specific, HMG-box) is...   513   e-146
gi|198442851 transcription factor 7 (T-cell specific, HMG-box) 6...   510   e-145
gi|42518078 transcription factor 7 (T-cell specific, HMG-box) is...   509   e-144
gi|42518080 transcription factor 7 (T-cell specific, HMG-box) is...   509   e-144
gi|47419938 transcription factor 7 (T-cell specific, HMG-box) is...   509   e-144
gi|195222732 lymphoid enhancer-binding factor 1 isoform 2 [Homo ...   245   3e-65
gi|195222734 lymphoid enhancer-binding factor 1 isoform 3 [Homo ...   244   6e-65
gi|226371764 transcription factor 7-like 2 isoform 1 [Homo sapiens]   236   1e-62
gi|226371625 transcription factor 7-like 2 isoform 5 [Homo sapiens]   234   8e-62
gi|226371623 transcription factor 7-like 2 isoform 4 [Homo sapiens]   234   8e-62
gi|7705917 lymphoid enhancer-binding factor 1 isoform 1 [Homo sa...   233   2e-61
gi|170014696 transcription factor 7-like 2 isoform 2 [Homo sapiens]   232   3e-61
gi|226371627 transcription factor 7-like 2 isoform 6 [Homo sapiens]   230   1e-60
gi|226371620 transcription factor 7-like 2 isoform 3 [Homo sapiens]   230   1e-60
gi|13786123 HMG-box transcription factor TCF-3 [Homo sapiens]         209   2e-54
gi|112421108 capicua homolog [Homo sapiens]                            71   1e-12
gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Hom...    64   1e-10
gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Hom...    64   1e-10
gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo...    64   1e-10
gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo...    64   1e-10
gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo...    60   3e-09
gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Hom...    60   3e-09
gi|8924248 SRY-box 18 [Homo sapiens]                                   60   3e-09
gi|30061558 SRY (sex determining region Y)-box 5 isoform c [Homo...    58   8e-09
gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo...    58   8e-09
gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo...    58   8e-09
gi|4557853 transcription factor SOX9 [Homo sapiens]                    57   2e-08
gi|41406089 SRY-box 13 [Homo sapiens]                                  57   2e-08

>gi|42518074 transcription factor 7 (T-cell specific, HMG-box)
           isoform 3 [Homo sapiens]
          Length = 269

 Score =  561 bits (1446), Expect = e-160
 Identities = 269/269 (100%), Positives = 269/269 (100%)

Query: 1   MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60
           MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP
Sbjct: 1   MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60

Query: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
           ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA
Sbjct: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120

Query: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
           IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE
Sbjct: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180

Query: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
           SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE
Sbjct: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240

Query: 241 STTETNWPRELKDGNGQESLSMSSSSSPA 269
           STTETNWPRELKDGNGQESLSMSSSSSPA
Sbjct: 241 STTETNWPRELKDGNGQESLSMSSSSSPA 269


>gi|198442849 transcription factor 7 (T-cell specific, HMG-box) 5
           [Homo sapiens]
          Length = 366

 Score =  513 bits (1320), Expect = e-146
 Identities = 244/252 (96%), Positives = 248/252 (98%)

Query: 1   MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60
           MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP
Sbjct: 1   MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60

Query: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
           ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA
Sbjct: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120

Query: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
           IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE
Sbjct: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180

Query: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
           SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE
Sbjct: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240

Query: 241 STTETNWPRELK 252
           STT+   P++ +
Sbjct: 241 STTDPGSPKKCR 252


>gi|42714657 transcription factor 7 (T-cell specific, HMG-box)
           isoform 4 [Homo sapiens]
          Length = 268

 Score =  513 bits (1320), Expect = e-146
 Identities = 244/252 (96%), Positives = 248/252 (98%)

Query: 1   MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60
           MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP
Sbjct: 1   MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60

Query: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
           ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA
Sbjct: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120

Query: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
           IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE
Sbjct: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180

Query: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
           SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE
Sbjct: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240

Query: 241 STTETNWPRELK 252
           STT+   P++ +
Sbjct: 241 STTDPGSPKKCR 252


>gi|198442851 transcription factor 7 (T-cell specific, HMG-box) 6
           [Homo sapiens]
          Length = 250

 Score =  510 bits (1314), Expect = e-145
 Identities = 243/246 (98%), Positives = 245/246 (99%)

Query: 1   MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60
           MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP
Sbjct: 1   MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60

Query: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
           ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA
Sbjct: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120

Query: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
           IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE
Sbjct: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180

Query: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
           SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE
Sbjct: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240

Query: 241 STTETN 246
           STT+ +
Sbjct: 241 STTDNS 246


>gi|42518078 transcription factor 7 (T-cell specific, HMG-box)
           isoform 2 [Homo sapiens]
          Length = 269

 Score =  509 bits (1311), Expect = e-144
 Identities = 243/243 (100%), Positives = 243/243 (100%)

Query: 1   MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60
           MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP
Sbjct: 1   MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60

Query: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
           ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA
Sbjct: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120

Query: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
           IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE
Sbjct: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180

Query: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
           SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE
Sbjct: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240

Query: 241 STT 243
           STT
Sbjct: 241 STT 243


>gi|42518080 transcription factor 7 (T-cell specific, HMG-box)
           isoform 1 [Homo sapiens]
          Length = 384

 Score =  509 bits (1311), Expect = e-144
 Identities = 243/243 (100%), Positives = 243/243 (100%)

Query: 1   MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60
           MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP
Sbjct: 116 MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 175

Query: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
           ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA
Sbjct: 176 ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 235

Query: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
           IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE
Sbjct: 236 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 295

Query: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
           SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE
Sbjct: 296 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 355

Query: 241 STT 243
           STT
Sbjct: 356 STT 358


>gi|47419938 transcription factor 7 (T-cell specific, HMG-box)
           isoform 2 [Homo sapiens]
          Length = 269

 Score =  509 bits (1311), Expect = e-144
 Identities = 243/243 (100%), Positives = 243/243 (100%)

Query: 1   MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60
           MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP
Sbjct: 1   MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAP 60

Query: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
           ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA
Sbjct: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120

Query: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
           IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE
Sbjct: 121 IVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180

Query: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
           SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE
Sbjct: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240

Query: 241 STT 243
           STT
Sbjct: 241 STT 243


>gi|195222732 lymphoid enhancer-binding factor 1 isoform 2 [Homo
           sapiens]
          Length = 371

 Score =  245 bits (626), Expect = 3e-65
 Identities = 134/220 (60%), Positives = 155/220 (70%), Gaps = 14/220 (6%)

Query: 37  QPPHGVPQLSLY-----EHFN-SPHPTPAPADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
           QP H V  L+       EHF+   HP+  P+D++ KQ + R    PD+  FY L+ G +G
Sbjct: 146 QPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVG 205

Query: 90  QLPHTVSWFTHPSLMLGSGVPG-HPAAIPHPAIVPPSGKQELQPFDRNL---KTQAESKA 145
           Q+   + WF+H  +    G PG H   IPHPAIV P  KQE    D +L   K Q E + 
Sbjct: 206 QITPPLGWFSHHMI---PGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRK 262

Query: 146 EKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYE 205
           E+E K+P IKKPLNAFMLYMKEMRA V+AECTLKESAAINQILGRRWHALSREEQAKYYE
Sbjct: 263 EQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYE 322

Query: 206 LARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTTET 245
           LARKERQLHMQLYPGWSARDNYGKKK+R REK QES + T
Sbjct: 323 LARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESASGT 362


>gi|195222734 lymphoid enhancer-binding factor 1 isoform 3 [Homo
           sapiens]
          Length = 386

 Score =  244 bits (623), Expect = 6e-65
 Identities = 133/218 (61%), Positives = 154/218 (70%), Gaps = 14/218 (6%)

Query: 37  QPPHGVPQLSLY-----EHFN-SPHPTPAPADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
           QP H V  L+       EHF+   HP+  P+D++ KQ + R    PD+  FY L+ G +G
Sbjct: 146 QPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVG 205

Query: 90  QLPHTVSWFTHPSLMLGSGVPG-HPAAIPHPAIVPPSGKQELQPFDRNL---KTQAESKA 145
           Q+   + WF+H  +    G PG H   IPHPAIV P  KQE    D +L   K Q E + 
Sbjct: 206 QITPPLGWFSHHMI---PGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRK 262

Query: 146 EKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYE 205
           E+E K+P IKKPLNAFMLYMKEMRA V+AECTLKESAAINQILGRRWHALSREEQAKYYE
Sbjct: 263 EQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYE 322

Query: 206 LARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTT 243
           LARKERQLHMQLYPGWSARDNYGKKK+R REK QES +
Sbjct: 323 LARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESAS 360


>gi|226371764 transcription factor 7-like 2 isoform 1 [Homo sapiens]
          Length = 602

 Score =  236 bits (603), Expect = 1e-62
 Identities = 134/257 (52%), Positives = 160/257 (62%), Gaps = 41/257 (15%)

Query: 37  QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
           Q PH V  L+       EHF   +P P  PAD+  K  + RP   PD+S +Y L+ G++G
Sbjct: 192 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 251

Query: 90  QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118
           Q+PH + W                F HP   +L + + +              H   IPH
Sbjct: 252 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 311

Query: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175
           PAIV P+ KQE    D    +     +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 312 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 371

Query: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
           CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 372 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 431

Query: 236 EKHQESTTETNWPRELK 252
           +K    T + N P++ +
Sbjct: 432 DKQPGETNDANTPKKCR 448


>gi|226371625 transcription factor 7-like 2 isoform 5 [Homo sapiens]
          Length = 579

 Score =  234 bits (596), Expect = 8e-62
 Identities = 133/257 (51%), Positives = 160/257 (62%), Gaps = 41/257 (15%)

Query: 37  QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
           Q PH V  L+       EHF   +P P  PAD+  K  + RP   PD+S +Y L+ G++G
Sbjct: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228

Query: 90  QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118
           Q+PH + W                F HP   +L + + +              H   IPH
Sbjct: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288

Query: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175
           PAIV P+ KQE    D    +     +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348

Query: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
           CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408

Query: 236 EKHQESTTETNWPRELK 252
           +K    T + + P++ +
Sbjct: 409 DKQPGETNDLSAPKKCR 425


>gi|226371623 transcription factor 7-like 2 isoform 4 [Homo sapiens]
          Length = 455

 Score =  234 bits (596), Expect = 8e-62
 Identities = 132/245 (53%), Positives = 152/245 (62%), Gaps = 37/245 (15%)

Query: 37  QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
           Q PH V  L+       EHF   +P P  PAD+  K  + RP   PD+S +Y L+ G++G
Sbjct: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228

Query: 90  QLPHTVSWFTHPSLMLGSGVPGHP---------------------------AAIPHPAIV 122
           Q+PH + W   P   + +G   HP                             IPHPAIV
Sbjct: 229 QIPHPLGWQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIV 288

Query: 123 PPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLK 179
            P+ KQE    D    +     +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AECTLK
Sbjct: 289 TPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLK 348

Query: 180 ESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQ 239
           ESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R+K  
Sbjct: 349 ESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQP 408

Query: 240 ESTTE 244
             T E
Sbjct: 409 GETNE 413


>gi|7705917 lymphoid enhancer-binding factor 1 isoform 1 [Homo
           sapiens]
          Length = 399

 Score =  233 bits (593), Expect = 2e-61
 Identities = 133/245 (54%), Positives = 154/245 (62%), Gaps = 36/245 (14%)

Query: 37  QPPHGVPQLSLY-----EHFN-SPHPTPAPADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
           QP H V  L+       EHF+   HP+  P+D++ KQ + R    PD+  FY L+ G +G
Sbjct: 146 QPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVG 205

Query: 90  QLPHTVSWFTHPSLMLGSG----------------------VPG----HPAAIPHPAIVP 123
           Q+   + W   P   +  G                      +PG    H   IPHPAIV 
Sbjct: 206 QITPPLGWQGQPVYPITGGFRQPYPSSLSVDTSMSRFSHHMIPGPPGPHTTGIPHPAIVT 265

Query: 124 PSGKQELQPFDRNL---KTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKE 180
           P  KQE    D +L   K Q E + E+E K+P IKKPLNAFMLYMKEMRA V+AECTLKE
Sbjct: 266 PQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKE 325

Query: 181 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQE 240
           SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R REK QE
Sbjct: 326 SAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKLQE 385

Query: 241 STTET 245
           S + T
Sbjct: 386 SASGT 390


>gi|170014696 transcription factor 7-like 2 isoform 2 [Homo sapiens]
          Length = 596

 Score =  232 bits (591), Expect = 3e-61
 Identities = 133/249 (53%), Positives = 155/249 (62%), Gaps = 41/249 (16%)

Query: 37  QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
           Q PH V  L+       EHF   +P P  PAD+  K  + RP   PD+S +Y L+ G++G
Sbjct: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228

Query: 90  QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118
           Q+PH + W                F HP   +L + + +              H   IPH
Sbjct: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288

Query: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175
           PAIV P+ KQE    D    +     +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348

Query: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
           CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408

Query: 236 EKHQESTTE 244
           +K    T E
Sbjct: 409 DKQPGETNE 417


>gi|226371627 transcription factor 7-like 2 isoform 6 [Homo sapiens]
          Length = 442

 Score =  230 bits (586), Expect = 1e-60
 Identities = 132/247 (53%), Positives = 154/247 (62%), Gaps = 41/247 (16%)

Query: 37  QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
           Q PH V  L+       EHF   +P P  PAD+  K  + RP   PD+S +Y L+ G++G
Sbjct: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228

Query: 90  QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118
           Q+PH + W                F HP   +L + + +              H   IPH
Sbjct: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288

Query: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175
           PAIV P+ KQE    D    +     +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348

Query: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
           CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408

Query: 236 EKHQEST 242
           +K    T
Sbjct: 409 DKQPGET 415


>gi|226371620 transcription factor 7-like 2 isoform 3 [Homo sapiens]
          Length = 489

 Score =  230 bits (586), Expect = 1e-60
 Identities = 132/247 (53%), Positives = 154/247 (62%), Gaps = 41/247 (16%)

Query: 37  QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
           Q PH V  L+       EHF   +P P  PAD+  K  + RP   PD+S +Y L+ G++G
Sbjct: 216 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 275

Query: 90  QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118
           Q+PH + W                F HP   +L + + +              H   IPH
Sbjct: 276 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 335

Query: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175
           PAIV P+ KQE    D    +     +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 336 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 395

Query: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
           CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 396 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 455

Query: 236 EKHQEST 242
           +K    T
Sbjct: 456 DKQPGET 462


>gi|13786123 HMG-box transcription factor TCF-3 [Homo sapiens]
          Length = 588

 Score =  209 bits (533), Expect = 2e-54
 Identities = 130/294 (44%), Positives = 163/294 (55%), Gaps = 53/294 (18%)

Query: 18  PPSGAGQHPQPQPPLHKANQPP--------HGVPQLSLY--EHFN--SPHPTPAPADISQ 65
           P S   +  +   P H +N+ P        H +  L  Y  +HF+  SP PT    +I  
Sbjct: 159 PSSATVKDTRSPSPAHLSNKVPVVQHPHHMHPLTPLITYSNDHFSPGSP-PTHLSPEIDP 217

Query: 66  KQ-VHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFT------------------HPSLMLG 106
           K  + RP    +LS +Y L+ G++GQ+PH + W                    +P+L + 
Sbjct: 218 KTGIPRPPHPSELSPYYPLSPGAVGQIPHPLGWLVPQQGQPMYSLPPGGFRHPYPALAMN 277

Query: 107 SGV--------------PGHP----AAIPHPAIVPPSGKQELQPFDRNLKTQAESKA--- 145
           + +              P HP    + IPHPAIV P  KQE  P   +     +S     
Sbjct: 278 ASMSSLVSSRFSPHMVAPAHPGLPTSGIPHPAIVSPIVKQEPAPPSLSPAVSVKSPVTVK 337

Query: 146 EKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYE 205
           ++E KKP +KKPLNAFMLYMKEMRAKV+AECTLKESAAINQILGR+WH LSREEQAKYYE
Sbjct: 338 KEEEKKPHVKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRKWHNLSREEQAKYYE 397

Query: 206 LARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTTETNWPRELKDGNGQES 259
           LARKERQLH QLYP WSARDNYGKKK+R REK    T      +E +     +S
Sbjct: 398 LARKERQLHSQLYPTWSARDNYGKKKKRKREKQLSQTQSQQQVQEAEGALASKS 451


>gi|112421108 capicua homolog [Homo sapiens]
          Length = 1608

 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 38/242 (15%)

Query: 3   KETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQ--LSLYEHFNSPHPTPAP 60
           KE   SA   + H  PP G G     +PP     + P   P   L + E    P PT   
Sbjct: 72  KEPAESA--AVAHERPPGGTGSADPERPPGATCPESPGPGPPHPLGVVESGKGPPPT--- 126

Query: 61  ADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPA 120
              ++++   P   P L         S  +  H  ++ +  S              P   
Sbjct: 127 ---TEEEASGPPGEPRLD--------SETESDHDDAFLSIMS--------------PEIQ 161

Query: 121 IVPPSGKQELQ-----PFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175
           +  P GK+  Q     P +R+  ++ + ++  + +K  I++P+NAFM++ K  RA V   
Sbjct: 162 LPLPPGKRRTQSLSALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQR 221

Query: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
              +++  +++ILG  W+AL  +E+ KY++LA + ++ H + +P W    N  +KK  S 
Sbjct: 222 HPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWK-WCNKDRKKSSSE 280

Query: 236 EK 237
            K
Sbjct: 281 AK 282


>gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Homo
           sapiens]
          Length = 841

 Score = 64.3 bits (155), Expect = 1e-10
 Identities = 34/102 (33%), Positives = 60/102 (58%), Gaps = 11/102 (10%)

Query: 139 TQAESKAEKEAK-----KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWH 193
           T AE++  ++A+     +P IK+P+NAFM++ K+ R K++       ++ I++ILG RW 
Sbjct: 614 TVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWK 673

Query: 194 ALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
           ++S +E+  YYE   +  ++H++ YP      NY  K R  R
Sbjct: 674 SMSNQEKQPYYEEQARLSKIHLEKYP------NYKYKPRPKR 709


>gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Homo
           sapiens]
          Length = 801

 Score = 64.3 bits (155), Expect = 1e-10
 Identities = 34/102 (33%), Positives = 60/102 (58%), Gaps = 11/102 (10%)

Query: 139 TQAESKAEKEAK-----KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWH 193
           T AE++  ++A+     +P IK+P+NAFM++ K+ R K++       ++ I++ILG RW 
Sbjct: 574 TVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWK 633

Query: 194 ALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
           ++S +E+  YYE   +  ++H++ YP      NY  K R  R
Sbjct: 634 SMSNQEKQPYYEEQARLSKIHLEKYP------NYKYKPRPKR 669


>gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo
           sapiens]
          Length = 804

 Score = 64.3 bits (155), Expect = 1e-10
 Identities = 34/102 (33%), Positives = 60/102 (58%), Gaps = 11/102 (10%)

Query: 139 TQAESKAEKEAK-----KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWH 193
           T AE++  ++A+     +P IK+P+NAFM++ K+ R K++       ++ I++ILG RW 
Sbjct: 577 TVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWK 636

Query: 194 ALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
           ++S +E+  YYE   +  ++H++ YP      NY  K R  R
Sbjct: 637 SMSNQEKQPYYEEQARLSKIHLEKYP------NYKYKPRPKR 672


>gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo
           sapiens]
          Length = 808

 Score = 64.3 bits (155), Expect = 1e-10
 Identities = 34/102 (33%), Positives = 60/102 (58%), Gaps = 11/102 (10%)

Query: 139 TQAESKAEKEAK-----KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWH 193
           T AE++  ++A+     +P IK+P+NAFM++ K+ R K++       ++ I++ILG RW 
Sbjct: 581 TVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWK 640

Query: 194 ALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
           ++S +E+  YYE   +  ++H++ YP      NY  K R  R
Sbjct: 641 SMSNQEKQPYYEEQARLSKIHLEKYP------NYKYKPRPKR 676


>gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo
           sapiens]
          Length = 501

 Score = 59.7 bits (143), Expect = 3e-09
 Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 11/131 (8%)

Query: 109 VPGHPAAIPHPAIVPPSGKQELQ-------PFDRNLKTQAESKAEKEAKKPTIKKPLNAF 161
           VP  P      +++ PS K E +       P D  +     SK     +   +K+P+NAF
Sbjct: 289 VPLTPVPTKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKD----RNGHVKRPMNAF 344

Query: 162 MLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGW 221
           M++ +  R  +        +A I+  LG  W+ LS E++  YY+ A+K ++ H + +PGW
Sbjct: 345 MVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGW 404

Query: 222 SARDNYGKKKR 232
             +   GK+KR
Sbjct: 405 VYQPRPGKRKR 415


>gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Homo
           sapiens]
          Length = 753

 Score = 59.7 bits (143), Expect = 3e-09
 Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 11/131 (8%)

Query: 109 VPGHPAAIPHPAIVPPSGKQELQ-------PFDRNLKTQAESKAEKEAKKPTIKKPLNAF 161
           VP  P      +++ PS K E +       P D  +     SK     +   +K+P+NAF
Sbjct: 289 VPLTPVPTKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKD----RNGHVKRPMNAF 344

Query: 162 MLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGW 221
           M++ +  R  +        +A I+  LG  W+ LS E++  YY+ A+K ++ H + +PGW
Sbjct: 345 MVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGW 404

Query: 222 SARDNYGKKKR 232
             +   GK+KR
Sbjct: 405 VYQPRPGKRKR 415


>gi|8924248 SRY-box 18 [Homo sapiens]
          Length = 384

 Score = 59.7 bits (143), Expect = 3e-09
 Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 12/130 (9%)

Query: 110 PGHPAAIPHPAIVPPS----GKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYM 165
           P  PA+ P P   PP     G+  L P  R      E +A  E++   I++P+NAFM++ 
Sbjct: 45  PAAPASPPSPQRSPPRSPEPGRYGLSPAGRG-----ERQAADESR---IRRPMNAFMVWA 96

Query: 166 KEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARD 225
           K+ R ++  +     +A ++++LG+ W  L+  E+  + E A + R  H++ +P +  R 
Sbjct: 97  KDERKRLAQQNPDLHNAVLSKMLGKAWKELNAAEKRPFVEEAERLRVQHLRDHPNYKYRP 156

Query: 226 NYGKKKRRSR 235
              K+ R++R
Sbjct: 157 RRKKQARKAR 166


>gi|30061558 SRY (sex determining region Y)-box 5 isoform c [Homo
           sapiens]
          Length = 377

 Score = 58.2 bits (139), Expect = 8e-09
 Identities = 28/86 (32%), Positives = 53/86 (61%), Gaps = 5/86 (5%)

Query: 141 AESKAEKEAK-----KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHAL 195
           +ES+  +E++     +P IK+P+NAFM++ K+ R K++       ++ I++ILG RW A+
Sbjct: 152 SESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAM 211

Query: 196 SREEQAKYYELARKERQLHMQLYPGW 221
           +  E+  YYE   +  + H++ YP +
Sbjct: 212 TNLEKQPYYEEQARLSKQHLEKYPDY 237


>gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo
           sapiens]
          Length = 750

 Score = 58.2 bits (139), Expect = 8e-09
 Identities = 28/86 (32%), Positives = 53/86 (61%), Gaps = 5/86 (5%)

Query: 141 AESKAEKEAK-----KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHAL 195
           +ES+  +E++     +P IK+P+NAFM++ K+ R K++       ++ I++ILG RW A+
Sbjct: 525 SESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAM 584

Query: 196 SREEQAKYYELARKERQLHMQLYPGW 221
           +  E+  YYE   +  + H++ YP +
Sbjct: 585 TNLEKQPYYEEQARLSKQHLEKYPDY 610


>gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo
           sapiens]
          Length = 763

 Score = 58.2 bits (139), Expect = 8e-09
 Identities = 28/86 (32%), Positives = 53/86 (61%), Gaps = 5/86 (5%)

Query: 141 AESKAEKEAK-----KPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHAL 195
           +ES+  +E++     +P IK+P+NAFM++ K+ R K++       ++ I++ILG RW A+
Sbjct: 538 SESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAM 597

Query: 196 SREEQAKYYELARKERQLHMQLYPGW 221
           +  E+  YYE   +  + H++ YP +
Sbjct: 598 TNLEKQPYYEEQARLSKQHLEKYPDY 623


>gi|4557853 transcription factor SOX9 [Homo sapiens]
          Length = 509

 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 5/155 (3%)

Query: 119 PAIVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTL 178
           P  +  +  Q L+ +D  L             KP +K+P+NAFM++ +  R K+  +   
Sbjct: 70  PVCIREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPH 129

Query: 179 KESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKH 238
             +A +++ LG+ W  L+  E+  + E A + R  H + +P +  +    K  +  + + 
Sbjct: 130 LHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEA 189

Query: 239 QESTTETNWP-----RELKDGNGQESLSMSSSSSP 268
           +E+T +T+       + L+  +   S  MS   SP
Sbjct: 190 EEATEQTHISPNAIFKALQADSPHSSSGMSEVHSP 224


>gi|41406089 SRY-box 13 [Homo sapiens]
          Length = 622

 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 23/68 (33%), Positives = 45/68 (66%)

Query: 154 IKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQL 213
           IK+P+NAFM++ K+ R K++       +++I++ILG RW +++ +E+  YYE   +  + 
Sbjct: 424 IKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQ 483

Query: 214 HMQLYPGW 221
           H++ YP +
Sbjct: 484 HLEKYPDY 491


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.128    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,225,947
Number of Sequences: 37866
Number of extensions: 791805
Number of successful extensions: 4772
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 317
Number of HSP's that attempted gapping in prelim test: 3867
Number of HSP's gapped (non-prelim): 1060
length of query: 269
length of database: 18,247,518
effective HSP length: 101
effective length of query: 168
effective length of database: 14,423,052
effective search space: 2423072736
effective search space used: 2423072736
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.