Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CUL7 Sequence: fasta or formatted (1698aa) NCBI GI: 41872646
Description:

cullin 7

Referenced in:

Anaphase-promoting Complex
Cullins and SCF Complexes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1        121           3
 C cysteine            1.8         31           1
 D aspartate           5.1         86           3
 E glutamate           7.8        133           6
 F phenylalanine       2.9         50           2
 G glycine             6.2        105           2
 H histidine           3.1         53           1
 I isoleucine          4.0         68           2
 K lysine              3.2         54           2
 L leucine            13.4        227           3
 M methionine          1.9         33           1
 N asparagine          2.8         48           2
 P proline             5.8         98           3
 Q glutamine           6.4        108           2
 R arginine            6.8        115           2
 S serine              7.6        129           3
 T threonine           3.9         66           2
 V valine              6.1        103           3
 W tryptophan          1.8         30           2
 Y tyrosine            2.4         40           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cullin 7 
CUL9                  0.386   p53-associated parkin-like cytoplasmic protein [Homo...
HERC2                 0.022   hect domain and RLD 2 
ZZEF1                 0.021   zinc finger, ZZ type with EF hand domain 1 
HECTD3                0.020   HECT domain containing 3 
CUL1                  0.009   cullin 1 
ANAPC10               0.006   anaphase promoting complex subunit 10 
CDC2L2                0.003   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.003   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.003   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.003   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.003   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.003   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.003   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.003   cell division cycle 2-like 1 (PITSLRE proteins) isof...
HIVEP1                0.003   human immunodeficiency virus type I enhancer bindin...
MSH6                  0.003   mutS homolog 6 
STARD13               0.003   StAR-related lipid transfer (START) domain containin...
STARD13               0.003   StAR-related lipid transfer (START) domain containin...
STARD13               0.003   StAR-related lipid transfer (START) domain containin...
SLC24A1               0.003   solute carrier family 24 (sodium/potassium/calcium ex...
SF3A3                 0.002   splicing factor 3a, subunit 3 
L1TD1                 0.002   LINE-1 type transposase domain containing 1 
NISCH                 0.002   nischarin 
ZNF622                0.002   zinc finger protein 622 
CENPB                 0.002   centromere protein B 
CMYA5                 0.002   cardiomyopathy associated 5 
MED17                 0.002   mediator complex subunit 17 
SMOX                  0.002   spermine oxidase isoform 4 
SMOX                  0.002   spermine oxidase isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press