Guide to the Human Genome
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Name: STARD13 Sequence: fasta or formatted (995aa) NCBI GI: 16445031
Description:

StAR-related lipid transfer (START) domain containing 13 isoform gamma

Referenced in:

Liver

Other entries for this name:
alt prot [1113aa] StAR-related lipid transfer (START) domain containing 13 isoform ...
alt prot [1105aa] StAR-related lipid transfer (START) domain containing 13 isoform ...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         50           3
 C cysteine            1.9         19           2
 D aspartate           5.8         58           2
 E glutamate           6.7         67           2
 F phenylalanine       3.0         30           2
 G glycine             6.3         63           2
 H histidine           3.5         35           1
 I isoleucine          2.9         29           1
 K lysine              5.4         54           2
 L leucine            10.7        106           3
 M methionine          2.2         22           1
 N asparagine          4.2         42           1
 P proline             6.6         66           3
 Q glutamine           5.0         50           2
 R arginine            6.2         62           2
 S serine              9.6         96           3
 T threonine           4.8         48           2
 V valine              6.8         68           2
 W tryptophan          1.3         13           1
 Y tyrosine            1.7         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   StAR-related lipid transfer (START) domain containin... 
STARD13               1.000   StAR-related lipid transfer (START) domain containin...
STARD13               1.000   StAR-related lipid transfer (START) domain containin...
DLC1                  0.487   deleted in liver cancer 1 isoform 1 
DLC1                  0.487   deleted in liver cancer 1 isoform 2 
STARD8                0.329   StAR-related lipid transfer (START) domain containi...
STARD8                0.329   StAR-related lipid transfer (START) domain containi...
STARD8                0.329   StAR-related lipid transfer (START) domain containin...
ARHGAP18              0.039   Rho GTPase activating protein 18 
C20orf95              0.034   PREDICTED: chromosome 20 open reading frame 95 [Hom...
C20orf95              0.034   PREDICTED: chromosome 20 open reading frame 95 [Hom...
C20orf95              0.034   PREDICTED: Rho GTPase-activating protein 18-like [H...
ARHGAP4               0.030   Rho GTPase activating protein 4 
ARHGAP6               0.030   Rho GTPase activating protein 6 isoform 4 
ARHGAP6               0.030   Rho GTPase activating protein 6 isoform 3 
ARHGAP6               0.030   Rho GTPase activating protein 6 isoform 1 
GRLF1                 0.029   glucocorticoid receptor DNA binding factor 1 
SH3BP1                0.029   SH3-domain binding protein 1 
SRGAP3                0.028   SLIT-ROBO Rho GTPase activating protein 3 isoform a ...
ARHGAP28              0.028   Rho GTPase activating protein 28 isoform a 
ARHGAP28              0.028   Rho GTPase activating protein 28 isoform b 
RALBP1                0.027   ralA binding protein 1 
SRGAP3                0.027   SLIT-ROBO Rho GTPase activating protein 3 isoform b ...
MYO9B                 0.026   myosin IXB isoform 2 
MYO9B                 0.026   myosin IXB isoform 1 
MYO9A                 0.025   myosin IXA 
ARHGAP17              0.025   nadrin isoform 1 
ARHGAP17              0.025   nadrin isoform 2 
SRGAP1                0.025   SLIT-ROBO Rho GTPase activating protein 1 
ARHGAP15              0.025   ARHGAP15 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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