Guide to the Human Genome
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Name: SMOX Sequence: fasta or formatted (502aa) NCBI GI: 28559076
Description:

spermine oxidase isoform 2

Referenced in:

Urea Cycle, Nitric Oxide, and Polyamines

Other entries for this name:
alt prot [555aa] spermine oxidase isoform 1
alt prot [190aa] spermine oxidase isoform 3
alt prot [532aa] spermine oxidase isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         36           3
 C cysteine            1.8          9           1
 D aspartate           4.0         20           2
 E glutamate           9.2         46           2
 F phenylalanine       3.8         19           2
 G glycine             8.6         43           2
 H histidine           3.4         17           2
 I isoleucine          4.8         24           2
 K lysine              3.8         19           1
 L leucine             8.4         42           2
 M methionine          1.6          8           1
 N asparagine          2.8         14           1
 P proline             5.8         29           2
 Q glutamine           3.6         18           2
 R arginine            7.0         35           3
 S serine              7.8         39           3
 T threonine           5.2         26           2
 V valine              6.4         32           3
 W tryptophan          1.6          8           1
 Y tyrosine            3.6         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   spermine oxidase isoform 2 
SMOX                  0.984   spermine oxidase isoform 4 
SMOX                  0.975   spermine oxidase isoform 1 
PAOX                  0.312   polyamine oxidase isoform 1 
SMOX                  0.266   spermine oxidase isoform 3 
PAOX                  0.202   polyamine oxidase isoform 4 
PAOX                  0.112   polyamine oxidase isoform 2 
KDM1                  0.102   amine oxidase (flavin containing) domain 2 isoform a...
KDM1                  0.102   amine oxidase (flavin containing) domain 2 isoform b...
AOF1                  0.080   amine oxidase (flavin containing) domain 1 
IL4I1                 0.030   interleukin 4 induced 1 isoform 1 precursor 
IL4I1                 0.030   interleukin 4 induced 1 isoform 2 
MAOA                  0.023   monoamine oxidase A 
MAOB                  0.021   monoamine oxidase B 
FMO1                  0.011   flavin containing monooxygenase 1 
FMO3                  0.010   flavin containing monooxygenase 3 isoform 2 
FMO3                  0.010   flavin containing monooxygenase 3 isoform 1 
PCYOX1                0.010   prenylcysteine oxidase 1 
DPYD                  0.009   dihydropyrimidine dehydrogenase isoform 1 
PPOX                  0.008   protoporphyrinogen oxidase 
PPOX                  0.008   protoporphyrinogen oxidase 
AIFM3                 0.008   apoptosis-inducing factor, mitochondrion-associated...
AIFM3                 0.008   apoptosis-inducing factor, mitochondrion-associated,...
AIFM3                 0.008   apoptosis-inducing factor, mitochondrion-associated,...
CUL7                  0.008   cullin 7 
RETSAT                0.008   all-trans-13,14-dihydroretinol saturase 
DMGDH                 0.007   dimethylglycine dehydrogenase precursor 
FILIP1L               0.007   filamin A interacting protein 1-like isoform 3 [Hom...
FILIP1L               0.007   filamin A interacting protein 1-like isoform 2 [Hom...
FILIP1L               0.007   filamin A interacting protein 1-like isoform 1 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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