MSH6 28765

Name: MSH6	Sequence: fasta or formatted (1360aa)		NCBI GI: 4504191
Description: mutS homolog 6		Referenced in: DNases, Recombination, and DNA Repair
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 88 4 C cysteine 2.4 32 1 D aspartate 5.4 74 2 E glutamate 8.8 120 5 F phenylalanine 3.9 53 2 G glycine 6.7 91 3 H histidine 1.9 26 1 I isoleucine 4.5 61 2 K lysine 7.4 101 3 L leucine 9.1 124 2 M methionine 2.2 30 2 N asparagine 3.3 45 2 P proline 4.7 64 2 Q glutamine 2.8 38 1 R arginine 6.3 86 3 S serine 8.6 117 2 T threonine 5.7 77 2 V valine 5.6 76 2 W tryptophan 1.2 16 2 Y tyrosine 3.0 41 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 mutS homolog 6 MSH3 0.098 mutS homolog 3 MSH2 0.077 mutS homolog 2 MSH5 0.043 mutS homolog 5 isoform c MSH5 0.043 mutS homolog 5 isoform c MSH5 0.043 mutS homolog 5 isoform a MSH5 0.042 mutS homolog 5 isoform b MSH4 0.038 mutS homolog 4 WHSC1L1 0.019 WHSC1L1 protein isoform long WHSC1L1 0.019 WHSC1L1 protein isoform short WHSC1 0.017 Wolf-Hirschhorn syndrome candidate 1 protein isoform... WHSC1 0.017 Wolf-Hirschhorn syndrome candidate 1 protein isoform... WHSC1 0.017 Wolf-Hirschhorn syndrome candidate 1 protein isoform ... WHSC1 0.017 Wolf-Hirschhorn syndrome candidate 1 protein isoform... WHSC1 0.017 Wolf-Hirschhorn syndrome candidate 1 protein isoform... WHSC1 0.017 Wolf-Hirschhorn syndrome candidate 1 protein isofor... HDGF2 0.011 hepatoma-derived growth factor-related protein 2 iso... HDGF2 0.011 hepatoma-derived growth factor-related protein 2 iso... ZCWPW1 0.010 zinc finger, CW type with PWWP domain 1 NSD1 0.010 nuclear receptor binding SET domain protein 1 isofor... NSD1 0.010 nuclear receptor binding SET domain protein 1 isofor... CHGB 0.010 chromogranin B precursor PSIP1 0.010 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo... PSIP1 0.010 PC4 and SFRS1 interacting protein 1 isoform 1 [Homo... PSIP1 0.010 PC4 and SFRS1 interacting protein 1 isoform 2 WDR87 0.010 NYD-SP11 protein N-PAC 0.008 cytokine-like nuclear factor n-pac ZRANB2 0.007 zinc finger protein 265 isoform 1 HDGFRP3 0.007 hepatoma-derived growth factor, related protein 3 [Ho... NEFM 0.007 neurofilament, medium polypeptide 150kDa isoform 1 ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.