MED17 24794

Name: MED17	Sequence: fasta or formatted (651aa)		NCBI GI: 28558975
Description: mediator complex subunit 17		Referenced in: Nuclear Receptors RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 39 3 C cysteine 1.4 9 1 D aspartate 5.2 34 2 E glutamate 6.3 41 4 F phenylalanine 2.9 19 1 G glycine 5.4 35 1 H histidine 3.1 20 2 I isoleucine 6.1 40 2 K lysine 7.1 46 3 L leucine 10.8 70 2 M methionine 2.0 13 2 N asparagine 3.8 25 2 P proline 5.2 34 2 Q glutamine 8.0 52 2 R arginine 4.3 28 1 S serine 10.3 67 2 T threonine 2.8 18 1 V valine 6.3 41 2 W tryptophan 1.4 9 1 Y tyrosine 1.7 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 mediator complex subunit 17 PKN2 0.006 protein kinase N2 CUL7 0.006 cullin 7 SGSM2 0.006 RUN and TBC1 domain containing 1 isoform 2 SGSM2 0.006 RUN and TBC1 domain containing 1 isoform 1 LOC100288142 0.006 PREDICTED: hypothetical protein XP_002344485 LOC100292407 0.006 PREDICTED: hypothetical protein C6orf154 0.006 hypothetical protein LOC221424 UXS1 0.006 UDP-glucuronate decarboxylase 1 ADAR 0.006 adenosine deaminase, RNA-specific isoform c ADAR 0.006 adenosine deaminase, RNA-specific isoform b ADAR 0.006 adenosine deaminase, RNA-specific isoform a AP3B1 0.005 adaptor-related protein complex 3, beta 1 subunit [H... SPANXN2 0.005 SPANX-N2 protein LOC100292655 0.004 PREDICTED: similar to armadillo repeat containing, ... EFCAB5 0.004 EF-hand calcium binding domain 5 isoform b EFCAB5 0.004 EF-hand calcium binding domain 5 isoform a PCDH8 0.004 protocadherin 8 isoform 2 precursor PCDH8 0.004 protocadherin 8 isoform 1 precursor OSBPL6 0.004 oxysterol-binding protein-like protein 6 isoform a [... SECISBP2 0.004 SECIS binding protein 2 NBPF11 0.004 hypothetical protein LOC728912 LOC200030 0.004 neuroblastoma breakpoint family, member 11-like [Ho... ANKS1A 0.004 ankyrin repeat and sterile alpha motif domain conta... DENND4A 0.004 DENN/MADD domain containing 4A isoform 1 DENND4A 0.004 DENN/MADD domain containing 4A isoform 2 ITPR1 0.004 inositol 1,4,5-triphosphate receptor, type 1 isofor... SYNE1 0.004 spectrin repeat containing, nuclear envelope 1 isofo... SYNE1 0.004 spectrin repeat containing, nuclear envelope 1 isof... CHD3 0.004 chromodomain helicase DNA binding protein 3 isoform... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.