Guide to the Human Genome
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Name: SFRS2B Sequence: fasta or formatted (282aa) NCBI GI: 15055543
Description:

splicing factor, arginine/serine-rich 2B

Referenced in:

Capping and Splicing

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5         10           2
 C cysteine            0.7          2           1
 D aspartate           3.9         11           1
 E glutamate           3.5         10           3
 F phenylalanine       1.4          4           1
 G glycine             7.8         22           3
 H histidine           2.1          6           1
 I isoleucine          0.7          2           1
 K lysine              3.9         11           1
 L leucine             2.1          6           1
 M methionine          1.8          5           1
 N asparagine          0.7          2           1
 P proline             6.7         19           3
 Q glutamine           1.4          4           1
 R arginine           22.3         63           3
 S serine             24.8         70           3
 T threonine           2.5          7           1
 V valine              3.5         10           1
 W tryptophan          0.0          0           0
 Y tyrosine            6.4         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   splicing factor, arginine/serine-rich 2B 
SFRS2                 0.472   splicing factor, arginine/serine-rich 2 
FUSIP1                0.191   FUS interacting protein (serine-arginine rich) 1 iso...
SRrp35                0.178   serine-arginine repressor protein 
SFRS4                 0.154   splicing factor, arginine/serine-rich 4 
SFRS7                 0.145   splicing factor, arginine/serine-rich 7 
SFRS6                 0.128   arginine/serine-rich splicing factor 6 
FUSIP1                0.125   FUS interacting protein (serine-arginine rich) 1 isof...
SFRS5                 0.125   splicing factor, arginine/serine-rich 5 
SFRS5                 0.125   splicing factor, arginine/serine-rich 5 
SFRS16                0.123   splicing factor, arginine/serine-rich 16 
LOC653884             0.123   PREDICTED: similar to FUS interacting protein (seri...
SRRM2                 0.119   splicing coactivator subunit SRm300 
RBMXL1                0.113   RNA binding motif protein, X-linked-like 1 
RBMXL1                0.113   RNA binding motif protein, X-linked-like 1 
SFRS3                 0.112   splicing factor, arginine/serine-rich 3 
SFRS1                 0.110   splicing factor, arginine/serine-rich 1 isoform 1 [Ho...
KIAA1853              0.110   KIAA1853 protein 
RBMX                  0.108   RNA binding motif protein, X-linked 
LOC100170229          0.106   hypothetical protein LOC100170229 
CIRBP                 0.106   cold inducible RNA binding protein 
SNRNP70               0.102   U1 small nuclear ribonucleoprotein 70 kDa 
BCLAF1                0.100   BCL2-associated transcription factor 1 isoform 3 [H...
BCLAF1                0.100   BCL2-associated transcription factor 1 isoform 1 [Hom...
SON                   0.099   SON DNA-binding protein isoform F 
SON                   0.099   SON DNA-binding protein isoform B 
LOC731605             0.093   PREDICTED: similar to BCL2-associated transcription...
ZRANB2                0.093   zinc finger protein 265 isoform 1 
BCLAF1                0.093   BCL2-associated transcription factor 1 isoform 2 [H...
RSRC1                 0.089   arginine/serine-rich coiled-coil 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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