Guide to the Human Genome
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Name: KIAA0922 Sequence: fasta or formatted (1609aa) NCBI GI: 187608809
Description:

hypothetical protein LOC23240 isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {1610aa} hypothetical protein LOC23240 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         85           3
 C cysteine            2.9         46           2
 D aspartate           4.2         67           2
 E glutamate           6.1         98           2
 F phenylalanine       4.7         76           2
 G glycine             5.4         87           2
 H histidine           2.6         42           2
 I isoleucine          4.5         73           2
 K lysine              5.7         92           3
 L leucine             9.3        149           3
 M methionine          2.0         32           1
 N asparagine          5.9         95           2
 P proline             6.5        105           2
 Q glutamine           4.4         71           2
 R arginine            3.8         61           2
 S serine             10.9        175           4
 T threonine           6.0         97           3
 V valine              5.7         92           3
 W tryptophan          1.5         24           1
 Y tyrosine            2.6         42           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC23240 isoform 2 
KIAA0922              0.999   hypothetical protein LOC23240 isoform 1 
TMEM131               0.070   RW1 protein 
NKTR                  0.006   natural killer-tumor recognition sequence 
SETD1A                0.005   SET domain containing 1A 
PHF3                  0.004   PHD finger protein 3 
TRAF3IP1              0.004   TNF receptor-associated factor 3 interacting protei...
BOD1L                 0.004   biorientation of chromosomes in cell division 1-like...
AIM1                  0.004   absent in melanoma 1 
AFF3                  0.004   AF4/FMR2 family, member 3 isoform 2 
AFF3                  0.004   AF4/FMR2 family, member 3 isoform 1 
TCOF1                 0.004   Treacher Collins-Franceschetti syndrome 1 isoform f...
TCOF1                 0.004   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.004   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.004   Treacher Collins-Franceschetti syndrome 1 isoform b ...
TCOF1                 0.004   Treacher Collins-Franceschetti syndrome 1 isoform a ...
TCOF1                 0.004   Treacher Collins-Franceschetti syndrome 1 isoform c ...
PASD1                 0.004   PAS domain containing 1 
REST                  0.003   RE1-silencing transcription factor 
ATXN2                 0.003   ataxin 2 
JMJD1C                0.003   jumonji domain containing 1C isoform a 
JMJD1C                0.003   jumonji domain containing 1C isoform b 
PCF11                 0.003   pre-mRNA cleavage complex II protein Pcf11 
LOC100133915          0.003   PREDICTED: hypothetical protein 
SEC31A                0.003   SEC31 homolog A isoform 3 
SEC31A                0.003   SEC31 homolog A isoform 1 
SEC31A                0.003   SEC31 homolog A isoform 4 
SEC31A                0.003   SEC31 homolog A isoform 2 
SEC31A                0.003   SEC31 homolog A isoform 1 
EZR                   0.003   ezrin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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