Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 41054804
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|41054804 hypothetical protein LOC84970 isoform b [Homo
sapiens]
(408 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|41054804 hypothetical protein LOC84970 isoform b [Homo sapiens] 857 0.0
gi|197927133 hypothetical protein LOC84970 isoform a [Homo sapiens] 857 0.0
gi|150170670 piccolo isoform 2 [Homo sapiens] 41 0.002
gi|150378539 piccolo isoform 1 [Homo sapiens] 41 0.002
gi|171543895 ataxin 2 [Homo sapiens] 38 0.019
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 37 0.042
gi|110349719 titin isoform N2-A [Homo sapiens] 36 0.072
gi|169214080 PREDICTED: hypothetical protein LOC646862 [Homo sap... 35 0.094
gi|169214500 PREDICTED: hypothetical protein LOC646862 [Homo sap... 35 0.094
gi|169213453 PREDICTED: hypothetical protein LOC646862 [Homo sap... 35 0.094
gi|39930575 shisa homolog 4 [Homo sapiens] 35 0.094
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 35 0.12
gi|139394604 bromo adjacent homology domain containing 1 [Homo s... 35 0.12
gi|13259529 survival of motor neuron 2, centromeric isoform b [H... 35 0.16
gi|13259531 survival of motor neuron 2, centromeric isoform c [H... 35 0.16
gi|13259512 survival of motor neuron 1, telomeric isoform b [Hom... 35 0.16
gi|192807332 arsenate resistance protein 2 isoform c [Homo sapiens] 34 0.21
gi|58331218 arsenate resistance protein 2 isoform a [Homo sapiens] 34 0.21
gi|40807475 PML-RARA regulated adaptor molecule 1 [Homo sapiens] 34 0.21
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 34 0.21
gi|15721939 metastatic lymph node 51 [Homo sapiens] 34 0.21
gi|33667044 ABI gene family, member 3 (NESH) binding protein [Ho... 34 0.27
gi|31543392 peroxisome proliferator-activated receptor gamma, co... 34 0.27
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 34 0.27
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 34 0.27
gi|40353729 Ras and Rab interactor 3 [Homo sapiens] 34 0.27
gi|148612882 cat eye syndrome chromosome region, candidate 2 [Ho... 34 0.27
gi|121114296 caudal type homeobox 1 [Homo sapiens] 33 0.36
gi|149944526 additional sex combs like 3 [Homo sapiens] 33 0.36
gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens] 33 0.47
>gi|41054804 hypothetical protein LOC84970 isoform b [Homo sapiens]
Length = 408
Score = 857 bits (2214), Expect = 0.0
Identities = 408/408 (100%), Positives = 408/408 (100%)
Query: 1 MPVISSRQDCDSATSTVTDILCAAEVKSSKGTEDRGRILGDSNLQVSKLLSQFPLKSTET 60
MPVISSRQDCDSATSTVTDILCAAEVKSSKGTEDRGRILGDSNLQVSKLLSQFPLKSTET
Sbjct: 1 MPVISSRQDCDSATSTVTDILCAAEVKSSKGTEDRGRILGDSNLQVSKLLSQFPLKSTET 60
Query: 61 SKVPDNKNVLDKTRVTKDFLQDNLFSGPGPKEPTGLSPFLLLPPRPPPARPDKLPELPAQ 120
SKVPDNKNVLDKTRVTKDFLQDNLFSGPGPKEPTGLSPFLLLPPRPPPARPDKLPELPAQ
Sbjct: 61 SKVPDNKNVLDKTRVTKDFLQDNLFSGPGPKEPTGLSPFLLLPPRPPPARPDKLPELPAQ 120
Query: 121 KRQLPVFAKICSKPKADPAVERHHLMEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEEGC 180
KRQLPVFAKICSKPKADPAVERHHLMEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEEGC
Sbjct: 121 KRQLPVFAKICSKPKADPAVERHHLMEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEEGC 180
Query: 181 CDAVGTASLTLPPKKPTCPAEKNLLYEFLGATKNPSGQPRLRNKVEVDGPELKFNAPVTV 240
CDAVGTASLTLPPKKPTCPAEKNLLYEFLGATKNPSGQPRLRNKVEVDGPELKFNAPVTV
Sbjct: 181 CDAVGTASLTLPPKKPTCPAEKNLLYEFLGATKNPSGQPRLRNKVEVDGPELKFNAPVTV 240
Query: 241 ADKNNPKYTGNVFTPHFPTAMTSATLNQPLWLNLNYPPPPVFTNHSTFLQYQGLYPQQAA 300
ADKNNPKYTGNVFTPHFPTAMTSATLNQPLWLNLNYPPPPVFTNHSTFLQYQGLYPQQAA
Sbjct: 241 ADKNNPKYTGNVFTPHFPTAMTSATLNQPLWLNLNYPPPPVFTNHSTFLQYQGLYPQQAA 300
Query: 301 RMPYQQALHPQLGCYSQQVMPYNPQQMGQQIFRSSYTPLLSYIPFVQPNYPYPQRTPPKM 360
RMPYQQALHPQLGCYSQQVMPYNPQQMGQQIFRSSYTPLLSYIPFVQPNYPYPQRTPPKM
Sbjct: 301 RMPYQQALHPQLGCYSQQVMPYNPQQMGQQIFRSSYTPLLSYIPFVQPNYPYPQRTPPKM 360
Query: 361 SANPRDPPLMAGDGPQYLFPQGYGFGSTSGGPLMHSPYFSSSGNGINF 408
SANPRDPPLMAGDGPQYLFPQGYGFGSTSGGPLMHSPYFSSSGNGINF
Sbjct: 361 SANPRDPPLMAGDGPQYLFPQGYGFGSTSGGPLMHSPYFSSSGNGINF 408
>gi|197927133 hypothetical protein LOC84970 isoform a [Homo sapiens]
Length = 598
Score = 857 bits (2214), Expect = 0.0
Identities = 408/408 (100%), Positives = 408/408 (100%)
Query: 1 MPVISSRQDCDSATSTVTDILCAAEVKSSKGTEDRGRILGDSNLQVSKLLSQFPLKSTET 60
MPVISSRQDCDSATSTVTDILCAAEVKSSKGTEDRGRILGDSNLQVSKLLSQFPLKSTET
Sbjct: 191 MPVISSRQDCDSATSTVTDILCAAEVKSSKGTEDRGRILGDSNLQVSKLLSQFPLKSTET 250
Query: 61 SKVPDNKNVLDKTRVTKDFLQDNLFSGPGPKEPTGLSPFLLLPPRPPPARPDKLPELPAQ 120
SKVPDNKNVLDKTRVTKDFLQDNLFSGPGPKEPTGLSPFLLLPPRPPPARPDKLPELPAQ
Sbjct: 251 SKVPDNKNVLDKTRVTKDFLQDNLFSGPGPKEPTGLSPFLLLPPRPPPARPDKLPELPAQ 310
Query: 121 KRQLPVFAKICSKPKADPAVERHHLMEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEEGC 180
KRQLPVFAKICSKPKADPAVERHHLMEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEEGC
Sbjct: 311 KRQLPVFAKICSKPKADPAVERHHLMEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEEGC 370
Query: 181 CDAVGTASLTLPPKKPTCPAEKNLLYEFLGATKNPSGQPRLRNKVEVDGPELKFNAPVTV 240
CDAVGTASLTLPPKKPTCPAEKNLLYEFLGATKNPSGQPRLRNKVEVDGPELKFNAPVTV
Sbjct: 371 CDAVGTASLTLPPKKPTCPAEKNLLYEFLGATKNPSGQPRLRNKVEVDGPELKFNAPVTV 430
Query: 241 ADKNNPKYTGNVFTPHFPTAMTSATLNQPLWLNLNYPPPPVFTNHSTFLQYQGLYPQQAA 300
ADKNNPKYTGNVFTPHFPTAMTSATLNQPLWLNLNYPPPPVFTNHSTFLQYQGLYPQQAA
Sbjct: 431 ADKNNPKYTGNVFTPHFPTAMTSATLNQPLWLNLNYPPPPVFTNHSTFLQYQGLYPQQAA 490
Query: 301 RMPYQQALHPQLGCYSQQVMPYNPQQMGQQIFRSSYTPLLSYIPFVQPNYPYPQRTPPKM 360
RMPYQQALHPQLGCYSQQVMPYNPQQMGQQIFRSSYTPLLSYIPFVQPNYPYPQRTPPKM
Sbjct: 491 RMPYQQALHPQLGCYSQQVMPYNPQQMGQQIFRSSYTPLLSYIPFVQPNYPYPQRTPPKM 550
Query: 361 SANPRDPPLMAGDGPQYLFPQGYGFGSTSGGPLMHSPYFSSSGNGINF 408
SANPRDPPLMAGDGPQYLFPQGYGFGSTSGGPLMHSPYFSSSGNGINF
Sbjct: 551 SANPRDPPLMAGDGPQYLFPQGYGFGSTSGGPLMHSPYFSSSGNGINF 598
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 41.2 bits (95), Expect = 0.002
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 286 STFLQYQ---GLYPQQAARMPYQQALHPQLGCYSQQVMPYNPQQMGQQIFRSSYTPLLSY 342
S + QYQ P QA QQ+ Q Y QQV PY Q Q + S+TP +
Sbjct: 3883 SPYTQYQYSSPALPTQAPTSYTQQSHFEQQTLYHQQVSPYQTQPTFQAVATMSFTPQVQP 3942
Query: 343 IPFVQPNYPYPQR 355
P QP+Y P +
Sbjct: 3943 TPTPQPSYQLPSQ 3955
Score = 31.2 bits (69), Expect = 1.8
Identities = 34/141 (24%), Positives = 50/141 (35%), Gaps = 11/141 (7%)
Query: 86 SGPGPKEPTGLSPFLLLPP--RPPPARPDKLPELPAQKRQLPVFAKICSKPKADPAVERH 143
S GP P +P PP + PP + P PA+ + K + K +P E+
Sbjct: 956 SQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAAEKLEPKAEQA 1015
Query: 144 HLMEWSPGTKEPKKGQGSLFLSQWPQS-------QKDACGEEGC--CDAVGTASLTLPPK 194
++ + K+P + S L+ PQ +K E C C PP
Sbjct: 1016 PTVKRTETEKKPPPIKDSKSLTAEPQKAVLPTKLEKSPKPESTCPLCKTELNIGSKDPPN 1075
Query: 195 KPTCPAEKNLLYEFLGATKNP 215
TC KN + G P
Sbjct: 1076 FNTCTECKNQVCNLCGFNPTP 1096
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 41.2 bits (95), Expect = 0.002
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 286 STFLQYQ---GLYPQQAARMPYQQALHPQLGCYSQQVMPYNPQQMGQQIFRSSYTPLLSY 342
S + QYQ P QA QQ+ Q Y QQV PY Q Q + S+TP +
Sbjct: 3883 SPYTQYQYSSPALPTQAPTSYTQQSHFEQQTLYHQQVSPYQTQPTFQAVATMSFTPQVQP 3942
Query: 343 IPFVQPNYPYPQR 355
P QP+Y P +
Sbjct: 3943 TPTPQPSYQLPSQ 3955
Score = 31.2 bits (69), Expect = 1.8
Identities = 34/141 (24%), Positives = 50/141 (35%), Gaps = 11/141 (7%)
Query: 86 SGPGPKEPTGLSPFLLLPP--RPPPARPDKLPELPAQKRQLPVFAKICSKPKADPAVERH 143
S GP P +P PP + PP + P PA+ + K + K +P E+
Sbjct: 956 SQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAAEKLEPKAEQA 1015
Query: 144 HLMEWSPGTKEPKKGQGSLFLSQWPQS-------QKDACGEEGC--CDAVGTASLTLPPK 194
++ + K+P + S L+ PQ +K E C C PP
Sbjct: 1016 PTVKRTETEKKPPPIKDSKSLTAEPQKAVLPTKLEKSPKPESTCPLCKTELNIGSKDPPN 1075
Query: 195 KPTCPAEKNLLYEFLGATKNP 215
TC KN + G P
Sbjct: 1076 FNTCTECKNQVCNLCGFNPTP 1096
>gi|171543895 ataxin 2 [Homo sapiens]
Length = 1313
Score = 37.7 bits (86), Expect = 0.019
Identities = 50/220 (22%), Positives = 81/220 (36%), Gaps = 31/220 (14%)
Query: 176 GEEGCCDAVGTASLTLPPKKPTCPAEKNLLYEFLGATKNPSG---------QPRLRNKVE 226
G E V T+S +K +K+ + +T NP+ QP+
Sbjct: 877 GPEVTSQGVQTSSPACKQEKDDKEEKKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPT 936
Query: 227 VDGPELKFNAPVTVADKNNPKYTGNV-FTPHFPTAMTSATLNQPLWLNLNYPPPPVFTNH 285
P+ + + + + P YT V F P+ + + QPL+ P P+ N
Sbjct: 937 SPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLY---PIPMTPMPVNQ 993
Query: 286 STFLQYQGLYPQQAARMPYQQAL-HPQLGC----------YSQQVMPYNPQQMGQQIFRS 334
+ + PQQ +Q A+ HP YS Q + Y+PQQ Q
Sbjct: 994 AKTYRAVPNMPQQRQDQHHQSAMMHPASAAGPPIAATPPAYSTQYVAYSPQQFPNQ---- 1049
Query: 335 SYTPLLSYIPFVQPNYPYPQRTPPKMSANPRDPPLMAGDG 374
PL+ ++P Q +P+ + +A PP A G
Sbjct: 1050 ---PLVQHVPHYQSQHPHVYSPVIQGNARMMAPPTHAQPG 1086
Score = 32.3 bits (72), Expect = 0.79
Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 19/97 (19%)
Query: 86 SGPGPKEPTGLSPFLLLPPRPPPARPDKLPE------LPAQKRQLPVFAKICSKPKADPA 139
SGP P +P PP PP+RP + P PA +P P+ P
Sbjct: 569 SGPNSLPPRAATP--TRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPK 626
Query: 140 VERHHLMEWSPGTKEPKKGQGSL-----FLSQWPQSQ 171
+RH P G+GS+ F+S P S+
Sbjct: 627 AQRH------PRNHRVSAGRGSISSGLEFVSHNPPSE 657
Score = 28.9 bits (63), Expect = 8.8
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 81 QDNLFSGPGPKEPTGLSPFLLLPPRPPPARPDKLPELPAQKRQLPVFAKICSKPKADPAV 140
Q ++ SG P PT +P +L+ +PP L + Q +PV P+V
Sbjct: 1248 QAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQ--PIPVSTTAHFPYMTHPSV 1305
Query: 141 ERHH 144
+ HH
Sbjct: 1306 QAHH 1309
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 36.6 bits (83), Expect = 0.042
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Query: 80 LQDNLFSGPGPKEPTGLSPFLL-----LPPRPPPARPDKLPELPAQKRQLPV 126
L+ + S PGP EP GL P L +P PP LPE P K + PV
Sbjct: 1513 LESPVASLPGPAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPV 1564
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 35.8 bits (81), Expect = 0.072
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 15/131 (11%)
Query: 90 PKEPTGLSPFLL-LPPRPPPARPDKLPE--LPAQKRQLPVFAKICSKPKADPAVERHHLM 146
PK+P P L+ +PPPA+ ++P+ +P +K +PV K+ + P P V + +
Sbjct: 9982 PKKPEEKVPVLIPKKEKPPPAKVPEVPKKPVPEEKVPVPVPKKVEAPPAKVPEVPKKPVP 10041
Query: 147 EWSPGTKEPKKGQGSLFLSQWPQSQKDACGEEGCCDAVGTASLTLPPKKP---------- 196
E PKK + ++ P+ K EE V PPK P
Sbjct: 10042 EKKVPVPAPKKVEAP--PAKVPEVPKKLIPEEKKPTPVPKKVEAPPPKVPKKREPVPVPV 10099
Query: 197 TCPAEKNLLYE 207
P E+ +L+E
Sbjct: 10100 ALPQEEEVLFE 10110
Score = 32.3 bits (72), Expect = 0.79
Identities = 67/321 (20%), Positives = 108/321 (33%), Gaps = 64/321 (19%)
Query: 90 PKEPTGLSPFLLLPPRPPPARPDKLPELPAQ---KRQLPVFAKICSKPKADP-------- 138
PKE PP+ P P K+PE P + ++++PV KP+ P
Sbjct: 10585 PKEVVPEKKVPAAPPKKPEVTPVKVPEAPKEVVPEKKVPVPPP--KKPEVPPTKVPEVPK 10642
Query: 139 -AVERHHLMEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEEGCCDAV------GTASLTL 191
AV + E P +P+ +F + ++ EE + V +T+
Sbjct: 10643 VAVPEKKVPEAIP--PKPESPPPEVF-----EEPEEVALEEPPAEVVEEPEPAAPPQVTV 10695
Query: 192 PPKKPTCPAEKNLLYEFLGATKNPSGQPRLRNKVEVDGPELKFNAPVTVADKNN------ 245
PPKKP P +K P P + +V PE K P+ V K
Sbjct: 10696 PPKKPV-PEKKAPAVVAKKPELPPVKVPEVPKEVV---PEKK--VPLVVPKKPEAPPAKV 10749
Query: 246 PKYTGNVFT---------PHFPTAMTSATLNQPLWLN---------LNYPPPPVFTNHST 287
P+ V P P A +P+ PPP V+
Sbjct: 10750 PEVPKEVVPEKKVAVPKKPEVPPAKVPEVPKKPVLEEKPAVPVPERAESPPPEVYEEPEE 10809
Query: 288 FLQYQGLYPQQAARMPYQQALHPQLGCYSQQVMPYNPQQMGQQIFRSSYTPLLSYIPFVQ 347
+ + P++ +P + P++ +P P++ I P++
Sbjct: 10810 IAPEEEIAPEEEKPVPVAEEEEPEV---PPPAVPEEPKK----IIPEKKVPVIKKPEAPP 10862
Query: 348 PNYPYPQRTPPKMSANPRDPP 368
P P P++ K PR PP
Sbjct: 10863 PKEPEPEKVIEKPKLKPRPPP 10883
Score = 29.3 bits (64), Expect = 6.7
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 15/118 (12%)
Query: 90 PKEPTGLSPFLLLPPRPPPARPDKLPELP---AQKRQLP--VFAKICSKPKADPAVERHH 144
PKE + PP+ P P K+PE+P ++++P + K S P P +
Sbjct: 10529 PKEVVPEKKVPVPPPKKPEVPPTKVPEVPKAAVPEKKVPEAIPPKPESPPPEVPEAPKEV 10588
Query: 145 LMEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEEGCCDAVGTASLTLPPKKPTCPAEK 202
+ E PKK + + + P++ K+ E+ PPKKP P K
Sbjct: 10589 VPEKKVPAAPPKKPE--VTPVKVPEAPKEVVPEK--------KVPVPPPKKPEVPPTK 10636
Score = 28.9 bits (63), Expect = 8.8
Identities = 64/299 (21%), Positives = 102/299 (34%), Gaps = 34/299 (11%)
Query: 90 PKEPTGLSPFLLLPPRPPPARPDKLPE-----LPAQKRQLPVFAKICSKPKADPAVERHH 144
PKE + P + P A P K+PE +P +K +P K P P V +
Sbjct: 10501 PKEVVPEKKVPVPPAKKPEAPPPKVPEAPKEVVPEKKVPVPPPKKPEVPPTKVPEVPKAA 10560
Query: 145 LMEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEEGCCDAVGTASLTLPPKKPTCPAEK-- 202
+ E P K + + P++ K+ E+ A PPKKP K
Sbjct: 10561 VPEKKVPEAIPPKPESP--PPEVPEAPKEVVPEKKVPAA--------PPKKPEVTPVKVP 10610
Query: 203 NLLYEFLGATKNPSGQPRLRNKVEVDGPELKFNAPVTVADKNNPKYTGNVFTPHFPTAMT 262
E + K P P+ K EV ++ V V +K P+ P P +
Sbjct: 10611 EAPKEVVPEKKVPVPPPK---KPEVPPTKVPEVPKVAVPEKKVPE-----AIPPKPESPP 10662
Query: 263 SATLNQPLWLNLNYPPPPVFTNHSTFLQYQGLYPQQAARMPYQQALHPQLGCYSQQVMPY 322
+P + L PP V Q P + P + P + ++ P
Sbjct: 10663 PEVFEEPEEVALEEPPAEVVEEPEPAAPPQVTVP---PKKPVPEKKAPAVVAKKPELPPV 10719
Query: 323 NPQQMGQQIFRSSYTPLL-----SYIPFVQPNYPYPQRTPPKMSANPRDPPLMAGDGPQ 376
++ +++ PL+ P P P + P K A P+ P + P+
Sbjct: 10720 KVPEVPKEVVPEKKVPLVVPKKPEAPPAKVPEVP-KEVVPEKKVAVPKKPEVPPAKVPE 10777
>gi|169214080 PREDICTED: hypothetical protein LOC646862 [Homo
sapiens]
Length = 329
Score = 35.4 bits (80), Expect = 0.094
Identities = 32/104 (30%), Positives = 42/104 (40%), Gaps = 14/104 (13%)
Query: 86 SGPGPKEPTGLSP---FLLLPPRPPPARP-----DKLPELPAQKRQLPVFAKICSKPKA- 136
SGP + L+P F PPRPPP P P P LP A+ +P+A
Sbjct: 229 SGPPRPQLVALAPAPGFSWFPPRPPPGSPWAPAWTPRPTGPDLDTALPGTAEDALEPEAG 288
Query: 137 --DPAVERHHLMEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEE 178
DPA L S GT + G G + WP+ + G +
Sbjct: 289 PEDPAEAERTLDRRSDGTWGTEAGPG---WAPWPRGARRLWGSQ 329
>gi|169214500 PREDICTED: hypothetical protein LOC646862 [Homo
sapiens]
Length = 329
Score = 35.4 bits (80), Expect = 0.094
Identities = 32/104 (30%), Positives = 42/104 (40%), Gaps = 14/104 (13%)
Query: 86 SGPGPKEPTGLSP---FLLLPPRPPPARP-----DKLPELPAQKRQLPVFAKICSKPKA- 136
SGP + L+P F PPRPPP P P P LP A+ +P+A
Sbjct: 229 SGPPRPQLVALAPAPGFSWFPPRPPPGSPWAPAWTPRPTGPDLDTALPGTAEDALEPEAG 288
Query: 137 --DPAVERHHLMEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEE 178
DPA L S GT + G G + WP+ + G +
Sbjct: 289 PEDPAEAERTLDRRSDGTWGTEAGPG---WAPWPRGARRLWGSQ 329
>gi|169213453 PREDICTED: hypothetical protein LOC646862 [Homo
sapiens]
Length = 329
Score = 35.4 bits (80), Expect = 0.094
Identities = 32/104 (30%), Positives = 42/104 (40%), Gaps = 14/104 (13%)
Query: 86 SGPGPKEPTGLSP---FLLLPPRPPPARP-----DKLPELPAQKRQLPVFAKICSKPKA- 136
SGP + L+P F PPRPPP P P P LP A+ +P+A
Sbjct: 229 SGPPRPQLVALAPAPGFSWFPPRPPPGSPWAPAWTPRPTGPDLDTALPGTAEDALEPEAG 288
Query: 137 --DPAVERHHLMEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEE 178
DPA L S GT + G G + WP+ + G +
Sbjct: 289 PEDPAEAERTLDRRSDGTWGTEAGPG---WAPWPRGARRLWGSQ 329
>gi|39930575 shisa homolog 4 [Homo sapiens]
Length = 197
Score = 35.4 bits (80), Expect = 0.094
Identities = 27/65 (41%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 322 YNPQQMGQQIFRSSYTPLLSYIPFVQPNYPYPQRTPPKMSANPRDPPLM---AGDGPQY- 377
Y +Q Q F P+ IP VQP YPYPQ PK P P M +G PQY
Sbjct: 115 YRRRQQLQSPFEGQEIPMTG-IP-VQPVYPYPQ--DPKAGPAPPQPGFMYPPSGPAPQYP 170
Query: 378 LFPQG 382
L+P G
Sbjct: 171 LYPAG 175
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 35.0 bits (79), Expect = 0.12
Identities = 70/285 (24%), Positives = 103/285 (36%), Gaps = 59/285 (20%)
Query: 89 GPKEPTGLS-----PFLLLPPRPPPARPDKLPELPAQKRQLPVFAKICSKPKADPAVERH 143
GP++P P + PP PP A+P P+LP Q++Q K K V+
Sbjct: 3191 GPQQPPQQQQQQQQPQVQQPPPPPAAQPPPTPQLPLQQQQQ-------RKDKDSEKVKEK 3243
Query: 144 HLMEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEEGCCDAVGTASLTLPPKKPTC-PAEK 202
++ KG+G P +K+ GE A T S LP + PA+
Sbjct: 3244 ---------EKAHKGKGEPL----PVPKKEK-GEAPTATAA-TISAPLPTMEYAVDPAQL 3288
Query: 203 NLLYEFLGATKNPSGQPRLRNKVEVDGPELKFNAPVTVADKNNPKYTGNVFTPHFPTAMT 262
L L T +P+ + L + P +P Y P P A+
Sbjct: 3289 QALQAAL--TSDPTAL--------LTSQFLPYFVPGF-----SPYYA-----PQIPGALQ 3328
Query: 263 SATLNQPLWLNLNYPPPPVFTNHSTFLQYQGLYPQQAARMPYQQALHPQLGCYSQ-QVMP 321
S L + +P P + L L Q YQQ+L + Q Q+
Sbjct: 3329 SGYLQPMYGMEGLFPYSPALSQALMGLSPGSLLQQY---QQYQQSLQEAIQQQQQRQLQQ 3385
Query: 322 YNPQQMGQQIFRSSYTPLLSYIPFVQPNYPYPQRTPPKMSANPRD 366
Q++ QQ ++S TP V P P P + P K S P +
Sbjct: 3386 QQQQKVQQQQPKASQTP-------VPPGAPSPDKDPAKESPKPEE 3423
>gi|139394604 bromo adjacent homology domain containing 1 [Homo
sapiens]
Length = 780
Score = 35.0 bits (79), Expect = 0.12
Identities = 83/351 (23%), Positives = 115/351 (32%), Gaps = 78/351 (22%)
Query: 89 GPK---EPTGLSPFLLLPPRPPPARPDKLPELPAQKRQLPVFAKICSK------------ 133
GP+ E L P L PP P P+ D P ++R + A+ +
Sbjct: 82 GPRSADEADELPPDLPKPPSPAPSSEDPGLAQPRKRRLASLNAEALNNLLLEREDTSSLA 141
Query: 134 -PKADPAVERHHLME-------WSPGTKEPKKGQ---GSLFLSQWPQSQKDACGEEGCCD 182
+ A + H + WS K P+ G GS LS P +EG
Sbjct: 142 GTRRSRAGDPHRSRDRDRATGGWSSSKKRPRLGDLGGGSRDLSPEPAP------DEG--- 192
Query: 183 AVGTASLTLPPKKPTCPAEKNLLYEFLGATKNPSGQPRL-----RNKVEVDGPELKFNAP 237
P++ PA K L A S + L R EVDG + AP
Sbjct: 193 ----------PRRDGDPAPKRLASLNAAAFLKLSQERELPLRLPRAHAEVDGRSTEPPAP 242
Query: 238 VTVADKNNPKYTGNVFTPHFPTAMTSATLNQPLWLNLNYPPPPVFTNHSTFLQYQGLYPQ 297
K PK G + + A + P W P P T +Q
Sbjct: 243 KAPRPKW-PKVNGKNYPKAWQGASSGEAAGPPGWQGCPDEPWPSATPCGPSVQ------- 294
Query: 298 QAARMPYQQALHPQLGCYSQQVMPYNPQQMGQQIF------RSSYTPLLSYIPFVQPNYP 351
+ P +AL LG + P+ P MG Q R QP++P
Sbjct: 295 -PSHQPLSKALESPLG-----LRPHLPLLMGGQAALKPEPGRPGEESPAPKQELHQPSFP 348
Query: 352 YPQRTPPKMSANPRD------PPLMAGDGPQYLF--PQGYGFGSTSGGPLM 394
PQ +P M NP D P + G YL+ +G G S P++
Sbjct: 349 TPQLSPLPMPGNPADYNGLCVGPELTALGSFYLYCGQEGLQCGGYSPCPML 399
>gi|13259529 survival of motor neuron 2, centromeric isoform b [Homo
sapiens]
Length = 262
Score = 34.7 bits (78), Expect = 0.16
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 41 DSNLQVSKLLSQFPLKSTETSKVPDNK--NVLDKTRVTKDFLQDNLFSGPGPKEPTGLSP 98
+ N Q ++ SQ +E S+ P NK N+ K+ FL P P L P
Sbjct: 153 EQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPP-----PPPMPGPRLGP 207
Query: 99 FLLLPPRPPPARPDKLPELPA 119
++PP PPP PD L + A
Sbjct: 208 GKIIPP-PPPICPDSLDDADA 227
>gi|13259531 survival of motor neuron 2, centromeric isoform c [Homo
sapiens]
Length = 250
Score = 34.7 bits (78), Expect = 0.16
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 41 DSNLQVSKLLSQFPLKSTETSKVPDNK--NVLDKTRVTKDFLQDNLFSGPGPKEPTGLSP 98
+ N Q ++ SQ +E S+ P NK N+ K+ FL P P L P
Sbjct: 153 EQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPP-----PPPMPGPRLGP 207
Query: 99 FLLLPPRPPPARPDKLPELPA 119
++PP PPP PD L + A
Sbjct: 208 GKIIPP-PPPICPDSLDDADA 227
>gi|13259512 survival of motor neuron 1, telomeric isoform b [Homo
sapiens]
Length = 262
Score = 34.7 bits (78), Expect = 0.16
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 41 DSNLQVSKLLSQFPLKSTETSKVPDNK--NVLDKTRVTKDFLQDNLFSGPGPKEPTGLSP 98
+ N Q ++ SQ +E S+ P NK N+ K+ FL P P L P
Sbjct: 153 EQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPP-----PPPMPGPRLGP 207
Query: 99 FLLLPPRPPPARPDKLPELPA 119
++PP PPP PD L + A
Sbjct: 208 GKIIPP-PPPICPDSLDDADA 227
>gi|192807332 arsenate resistance protein 2 isoform c [Homo sapiens]
Length = 875
Score = 34.3 bits (77), Expect = 0.21
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 20/69 (28%)
Query: 344 PFVQPNYPYPQRTPPKMS--ANPRDPPLMAGDGPQYLFPQGYGFGS------TSGGPLMH 395
P + P PYP +TP + PR P L GYG G+ T G P H
Sbjct: 778 PGLTPGLPYPHQTPQGLMPYGQPRPPIL------------GYGAGAVRPAVPTGGPPYPH 825
Query: 396 SPYFSSSGN 404
+PY + GN
Sbjct: 826 APYGAGRGN 834
>gi|58331218 arsenate resistance protein 2 isoform a [Homo sapiens]
Length = 876
Score = 34.3 bits (77), Expect = 0.21
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 20/69 (28%)
Query: 344 PFVQPNYPYPQRTPPKMS--ANPRDPPLMAGDGPQYLFPQGYGFGS------TSGGPLMH 395
P + P PYP +TP + PR P L GYG G+ T G P H
Sbjct: 779 PGLTPGLPYPHQTPQGLMPYGQPRPPIL------------GYGAGAVRPAVPTGGPPYPH 826
Query: 396 SPYFSSSGN 404
+PY + GN
Sbjct: 827 APYGAGRGN 835
>gi|40807475 PML-RARA regulated adaptor molecule 1 [Homo sapiens]
Length = 669
Score = 34.3 bits (77), Expect = 0.21
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 59 ETSKVPDNKNVLDKTRVTKDFLQDNLFSGPGPKEP----TGLSPFLLLPPRP-----PPA 109
E + +P + L+ + ++K F Q L + P P++P G +P P P P
Sbjct: 111 EVTDLPKKPSKLELSDLSKKFPQ--LGATPFPRKPLQPEVGEAPLKASLPEPGAPARKPL 168
Query: 110 RPDKL--PELPAQKRQLPVFAKICSKPKADPAVERHHLMEWSPGTKEPKKGQGSLFLSQW 167
+PD+L P P + + F + +P+A A R E S K+P + + +++ +
Sbjct: 169 QPDELSHPARPPSEPKSGAFPRKLWQPEAGEATPRSPQPELSTFPKKPAQPEFNVYPKKP 228
Query: 168 PQSQ 171
PQ Q
Sbjct: 229 PQPQ 232
Score = 33.5 bits (75), Expect = 0.36
Identities = 35/133 (26%), Positives = 48/133 (36%), Gaps = 19/133 (14%)
Query: 88 PGPKEPTGLSPFLLLPPRPPPARPDKLPELPAQKRQLPVFAKICSKPKADPAVERHHLME 147
P P E T L P +PPP LP+ P ++ PK P E L
Sbjct: 71 PPPPEVTDL------PKKPPPPEVTDLPKKPPP-------PEVTDLPKKPPPPEVTDL-- 115
Query: 148 WSPGTKEPKKGQGSLFLSQWPQSQKDACGEEGCCDAVGTASLTLPPKKPTCPAEKNLLYE 207
K+P K + S ++PQ + VG A L +P PA K L +
Sbjct: 116 ----PKKPSKLELSDLSKKFPQLGATPFPRKPLQPEVGEAPLKASLPEPGAPARKPLQPD 171
Query: 208 FLGATKNPSGQPR 220
L P +P+
Sbjct: 172 ELSHPARPPSEPK 184
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 34.3 bits (77), Expect = 0.21
Identities = 36/124 (29%), Positives = 45/124 (36%), Gaps = 18/124 (14%)
Query: 86 SGPGPKEPTGLSPFL-LLPPRPPPARPDKLPELPAQKRQLPVFAKICSKPKADPAVERHH 144
S P P P SP L PP PPP P LP P P A+ + P V
Sbjct: 412 SPPPPLPPPSTSPPPPLCPPPPPPVSPPPLPSPP------PPPAQEEQEESPPPVV---- 461
Query: 145 LMEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEEGCCDAVGTASLTL--PPKKPTCPAEK 202
P T K+G+ L SQ + + G EG T S PP+ A K
Sbjct: 462 -----PATCSRKRGRPPLTPSQRAEREAARAGPEGTSPPTPTPSTATGGPPEDSPTVAPK 516
Query: 203 NLLY 206
+ +
Sbjct: 517 STTF 520
>gi|15721939 metastatic lymph node 51 [Homo sapiens]
Length = 703
Score = 34.3 bits (77), Expect = 0.21
Identities = 32/122 (26%), Positives = 43/122 (35%), Gaps = 21/122 (17%)
Query: 277 PPPPVFTNHSTFLQYQGLYPQQAARMPYQQALHPQLGCYSQQVMPYNPQQMGQQIFRSSY 336
PP + L + GL+P Q A P G Y V Q QQ+ +Y
Sbjct: 568 PPQGMLVQPGMNLPHPGLHPHQTP------APLPNPGLYPPPVSMSPGQPPPQQLLAPTY 621
Query: 337 TPLLSYIPFVQPNYPY-PQRTPPKMSANPRDPPLMAGDGPQYLFPQGYGFGSTSGGPLMH 395
+ F P+YPY P PP PP P +L+P GG +
Sbjct: 622 FSAPGVMNFGNPSYPYAPGALPP--------PP------PPHLYPNTQAPSQVYGGVTYY 667
Query: 396 SP 397
+P
Sbjct: 668 NP 669
>gi|33667044 ABI gene family, member 3 (NESH) binding protein [Homo
sapiens]
Length = 1075
Score = 33.9 bits (76), Expect = 0.27
Identities = 48/216 (22%), Positives = 81/216 (37%), Gaps = 42/216 (19%)
Query: 150 PGTKEPKKGQGSLFLSQWPQSQKDACGEEGCCDAVGTASLTLPP---------------- 193
PGT+ P + P + G+ G + + +T PP
Sbjct: 702 PGTRRPPLPPRPTHPRRKPLPPNNVTGKPGSAGIISSGPITTPPLRSTPRPTGTPLERIE 761
Query: 194 ---KKPTCPAEKNLLYEFLGATKNPSGQPRLRNKVEVDGPELKF-----NAPVTVAD--K 243
K+PT PA L + +P+ + K GP +++ N+P ++ D K
Sbjct: 762 TDIKQPTVPASGEELENITDFSSSPTRETDPLGKPRFKGPHVRYIQKPDNSPCSITDSVK 821
Query: 244 NNPK---YTGNVFTP--HFPTAMTSATLNQ-PLWLNLNYPPP--PVFTNHSTFLQYQGLY 295
PK GN +P + PT +T T+ P ++ L++ P T + + G +
Sbjct: 822 RFPKEEATEGNATSPPQNPPTNLTVVTVEGCPSFVILDWEKPLNDTVTEYEVISRENGSF 881
Query: 296 --PQQAARMPYQ-----QALHPQLGCYSQQVMPYNP 324
++ +M Q + L P Y QV P NP
Sbjct: 882 SGKNKSIQMTNQTFSTVENLKPNTS-YEFQVKPKNP 916
>gi|31543392 peroxisome proliferator-activated receptor gamma,
coactivator 1 beta [Homo sapiens]
Length = 1023
Score = 33.9 bits (76), Expect = 0.27
Identities = 51/211 (24%), Positives = 78/211 (36%), Gaps = 40/211 (18%)
Query: 176 GEEGCCDAVGTASLTLPP----KKPTCPA----EKNLLYEFLGATKNPSGQPRLRNKVEV 227
G+ C + A + PP +KP+ PA E +LL + L AT P+ + +
Sbjct: 119 GDALSCTSASPAPSSAPPSPAPEKPSAPAPEVDELSLLQKLLLATSYPTSSSDTQKEGTA 178
Query: 228 ---DGPELKFNAPVTVADKNNPKYTGNVFTPHFPTAMTSAT-LNQPLWLNLNYPPPPVFT 283
G K P AD K P + S T L++ L T
Sbjct: 179 WRQAGLRSKSQRPCVKADSTQDKKA-----PMMQSQSRSCTELHKHL------------T 221
Query: 284 NHSTFLQYQGLYPQ--QAARMPYQQALHPQLGCYSQQVMPYNPQQM--------GQQIFR 333
+ LQ +GL P Q+ R+P ++ P C S Q P +PQ G + +
Sbjct: 222 SAQCCLQDRGLQPPCLQSPRLPAKEDKEPGEDCPSPQPAPASPQDSLALGRADPGAPVSQ 281
Query: 334 SSYTPLLSYIPFVQPNYPYPQRTPPKMSANP 364
++ I ++ Y PQR P + P
Sbjct: 282 EDMQAMVQLIRYMH-TYCLPQRKLPPQTPEP 311
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 33.9 bits (76), Expect = 0.27
Identities = 28/110 (25%), Positives = 39/110 (35%), Gaps = 9/110 (8%)
Query: 87 GPGPKEPTGLSPFLLLPP--RPPPARPDKLPELPAQKRQLPVFAKICSKPKADPAVERHH 144
G P P G+ P PP +PPP LP Q++Q P P ++
Sbjct: 468 GMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPP------PPPPPSSSMASST 521
Query: 145 LMEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEEGCCDAVGTASLT-LPP 193
+ W T G+ + W Q Q A G G ++ LPP
Sbjct: 522 PLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPP 571
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 33.9 bits (76), Expect = 0.27
Identities = 28/110 (25%), Positives = 39/110 (35%), Gaps = 9/110 (8%)
Query: 87 GPGPKEPTGLSPFLLLPP--RPPPARPDKLPELPAQKRQLPVFAKICSKPKADPAVERHH 144
G P P G+ P PP +PPP LP Q++Q P P ++
Sbjct: 468 GMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPP------PPPPPSSSMASST 521
Query: 145 LMEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEEGCCDAVGTASLT-LPP 193
+ W T G+ + W Q Q A G G ++ LPP
Sbjct: 522 PLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPP 571
>gi|40353729 Ras and Rab interactor 3 [Homo sapiens]
Length = 985
Score = 33.9 bits (76), Expect = 0.27
Identities = 36/141 (25%), Positives = 47/141 (33%), Gaps = 17/141 (12%)
Query: 88 PGPKEPTGLSPFLLLPPRPPPARPDKLPELPAQKRQLPVFAKICSKP----KADPAVERH 143
P P SP PR PP P LP P Q PV + P P V
Sbjct: 261 PLPPTSDATSPTSRWAPRRPPPPPPVLPLQPCSPAQPPVLPALAPAPACPLPTSPPVPAP 320
Query: 144 HLMEWSPGTKEPKKGQGSLFLSQ--WPQSQKDACGEEGCCDAVGTASLTLPPKKPTCPAE 201
H+ +PG + + + P + EE ++ L P P PA+
Sbjct: 321 HVTPHAPGPPDHPNQPPMMTCERLPCPTAGLGPLREEAMKPGAASSPLQQVP-APPLPAK 379
Query: 202 KNLLYEFLGATKNPSGQPRLR 222
KNL P+ PR R
Sbjct: 380 KNL----------PTAPPRRR 390
>gi|148612882 cat eye syndrome chromosome region, candidate 2 [Homo
sapiens]
Length = 1484
Score = 33.9 bits (76), Expect = 0.27
Identities = 43/147 (29%), Positives = 56/147 (38%), Gaps = 21/147 (14%)
Query: 255 PHFPTAMTSATLNQ--PLWL-NLNYPPPPVFTNHSTFLQYQGLYPQQAARMPYQQALH-P 310
P +T T++Q PL++ L YP + S LQ G+ P + P H P
Sbjct: 1122 PSTDPGLTGGTVSQFPPLYMPGLEYPNSAAHYHISPGLQ--GVGPVMGGKSPASHPQHFP 1179
Query: 311 QLGCYSQQVMPYNPQQMGQQIFRSSYTPLLSYIPFVQPNYPYPQRTPPKMSANPRDPPLM 370
G S +P G +R SY P QP+Y + QRTP P
Sbjct: 1180 PRGFQSN-----HPHSGGFPRYRPPQGMRYSYHPPPQPSYHHYQRTPYYAC------PQS 1228
Query: 371 AGDGPQYLFPQGYGFGSTSGGPLMHSP 397
D + L PQ GS SG P P
Sbjct: 1229 FSDWQRPLHPQ----GSPSGPPASQPP 1251
>gi|121114296 caudal type homeobox 1 [Homo sapiens]
Length = 265
Score = 33.5 bits (75), Expect = 0.36
Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
Query: 88 PGPKEPT--GLSPFLLLPPRPPPARPDKLPELPAQKRQLPVFAKICSKPKADPAVERHHL 145
PGP P GL P PP PPPA P + P+ + P A + PA +
Sbjct: 15 PGPARPASLGLGPQAYGPPAPPPA-PPQYPDFSSYSHVEPAPAPPTAWGAPFPAPKDDWA 73
Query: 146 MEWSPGTKEPKKGQGSL 162
+ PG P SL
Sbjct: 74 AAYGPGPAAPAASPASL 90
>gi|149944526 additional sex combs like 3 [Homo sapiens]
Length = 2248
Score = 33.5 bits (75), Expect = 0.36
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 16/67 (23%)
Query: 88 PGPKEPTGLSPFLLLPPRPPPARPDKLP----ELPAQKRQLPVFAK------------IC 131
P P P P L LPP PPP P P E+P+ ++Q PV + IC
Sbjct: 2017 PPPPPPPPPPPPLALPPPPPPPPPLPPPLPNAEVPSDQKQPPVTMETTKRLSWPQSTGIC 2076
Query: 132 SKPKADP 138
S K++P
Sbjct: 2077 SNIKSEP 2083
>gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens]
Length = 1006
Score = 33.1 bits (74), Expect = 0.47
Identities = 35/121 (28%), Positives = 48/121 (39%), Gaps = 18/121 (14%)
Query: 86 SGPGPKEPTGLSPFLLLPPRPPPARPDKLPELPAQKRQLPVFAKICSKPKADPAVERHHL 145
+G P++PT S P R P P LP R P+ AK +P PA +R
Sbjct: 314 AGTPPQQPTAPSSEWPGPQRSPGTGPRWTAPLP---RPAPLPAK---RPGDSPASKRPRP 367
Query: 146 MEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEEGCC-----DAVGTASLTLPPKKPTCPA 200
SP ++P KG+ P +A GE G DA+G L ++ P
Sbjct: 368 GGVSPEARDPPKGEN-------PLCSSEAAGETGPTQVRGPDALGGGRLQGKGREGKAPG 420
Query: 201 E 201
E
Sbjct: 421 E 421
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.134 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,477,603
Number of Sequences: 37866
Number of extensions: 1190549
Number of successful extensions: 5382
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 193
Number of HSP's that attempted gapping in prelim test: 4830
Number of HSP's gapped (non-prelim): 669
length of query: 408
length of database: 18,247,518
effective HSP length: 105
effective length of query: 303
effective length of database: 14,271,588
effective search space: 4324291164
effective search space used: 4324291164
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.