Guide to the Human Genome
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Name: C1orf94 Sequence: fasta or formatted (598aa) NCBI GI: 197927133
Description:

hypothetical protein LOC84970 isoform a

Not currently referenced in the text

Other entries for this name:
alt prot {408aa} hypothetical protein LOC84970 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         34           2
 C cysteine            2.0         12           2
 D aspartate           3.7         22           1
 E glutamate           5.5         33           2
 F phenylalanine       3.7         22           1
 G glycine             8.0         48           4
 H histidine           1.5          9           2
 I isoleucine          2.5         15           2
 K lysine              6.0         36           2
 L leucine            10.4         62           3
 M methionine          2.0         12           1
 N asparagine          3.8         23           2
 P proline            11.7         70           4
 Q glutamine           6.5         39           2
 R arginine            4.2         25           3
 S serine              8.9         53           3
 T threonine           5.2         31           1
 V valine              5.0         30           2
 W tryptophan          1.0          6           1
 Y tyrosine            2.7         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC84970 isoform a 
C1orf94               0.688   hypothetical protein LOC84970 isoform b 
PCLO                  0.013   piccolo isoform 2 
PCLO                  0.013   piccolo isoform 1 
ATXN2                 0.011   ataxin 2 
PTPN23                0.010   protein tyrosine phosphatase, non-receptor type 23 [...
TTN                   0.009   titin isoform N2-A 
LOC646862             0.008   PREDICTED: hypothetical protein LOC646862 
LOC646862             0.008   PREDICTED: hypothetical protein LOC646862 
LOC646862             0.008   PREDICTED: hypothetical protein LOC646862 
MLL2                  0.008   myeloid/lymphoid or mixed-lineage leukemia 2 
SHISA4                0.008   shisa homolog 4 
PDCD6IP               0.008   programmed cell death 6 interacting protein isoform...
PDCD6IP               0.008   programmed cell death 6 interacting protein isoform ...
NINL                  0.008   ninein-like 
ZFHX3                 0.008   AT-binding transcription factor 1 
BAHD1                 0.008   bromo adjacent homology domain containing 1 
SMN2                  0.008   survival of motor neuron 2, centromeric isoform b [H...
SMN2                  0.008   survival of motor neuron 2, centromeric isoform c [H...
SMN1                  0.008   survival of motor neuron 1, telomeric isoform b [Hom...
NACA                  0.008   nascent polypeptide-associated complex alpha subuni...
SRRT                  0.007   arsenate resistance protein 2 isoform c 
SRRT                  0.007   arsenate resistance protein 2 isoform a 
PRAM1                 0.007   PML-RARA regulated adaptor molecule 1 
MLL4                  0.007   myeloid/lymphoid or mixed-lineage leukemia 4 
CASC3                 0.007   metastatic lymph node 51 
ABI3BP                0.007   ABI gene family, member 3 (NESH) binding protein [Ho...
PPARGC1B              0.007   peroxisome proliferator-activated receptor gamma, co...
SF1                   0.007   splicing factor 1 isoform 2 
SF1                   0.007   splicing factor 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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