SMN2 3104

Name: SMN2	Sequence: fasta or formatted (250aa)		NCBI GI: 13259531
Description: survival of motor neuron 2, centromeric isoform c		Referenced in: Capping and Splicing
Other entries for this name: alt prot [294aa] survival of motor neuron 2, centromeric isoform d alt prot [282aa] survival of motor neuron 2, centromeric isoform a alt prot [262aa] survival of motor neuron 2, centromeric isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.2 18 2 C cysteine 2.4 6 1 D aspartate 7.2 18 2 E glutamate 6.0 15 2 F phenylalanine 1.6 4 1 G glycine 8.0 20 3 H histidine 0.8 2 1 I isoleucine 5.6 14 2 K lysine 8.0 20 2 L leucine 5.2 13 2 M methionine 2.8 7 1 N asparagine 5.6 14 2 P proline 9.2 23 5 Q glutamine 3.6 9 2 R arginine 2.8 7 2 S serine 10.8 27 2 T threonine 4.4 11 2 V valine 3.6 9 3 W tryptophan 2.0 5 1 Y tyrosine 3.2 8 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 survival of motor neuron 2, centromeric isoform c [H... SMN2 0.986 survival of motor neuron 2, centromeric isoform b [H... SMN1 0.986 survival of motor neuron 1, telomeric isoform b [Hom... SMN2 0.966 survival of motor neuron 2, centromeric isoform a [H... SMN2 0.952 survival of motor neuron 2, centromeric isoform d [H... SMN1 0.952 survival of motor neuron 1, telomeric isoform d [Homo... SMNDC1 0.070 survival motor neuron domain containing 1 TDRD3 0.038 tudor domain containing 3 isoform 2 TDRD3 0.038 tudor domain containing 3 isoform 1 TDRD3 0.038 tudor domain containing 3 isoform 2 CHD3 0.036 chromodomain helicase DNA binding protein 3 isoform... RXRB 0.036 retinoid X receptor, beta FMNL1 0.032 formin-like 1 DIAPH1 0.030 diaphanous 1 isoform 2 DIAPH1 0.030 diaphanous 1 isoform 1 DIAPH2 0.030 diaphanous 2 isoform 12C DIAPH2 0.030 diaphanous 2 isoform 156 KCNC3 0.028 Shaw-related voltage-gated potassium channel protein... PXK 0.026 PX domain containing serine/threonine kinase MLL4 0.026 myeloid/lymphoid or mixed-lineage leukemia 4 EVL 0.026 Enah/Vasp-like DAAM1 0.026 dishevelled-associated activator of morphogenesis 1 ... DIAPH3 0.026 diaphanous homolog 3 isoform b DIAPH3 0.026 diaphanous homolog 3 isoform a DHX37 0.026 DEAH (Asp-Glu-Ala-His) box polypeptide 37 FMN2 0.024 formin 2 SH3BP2 0.022 SH3-domain binding protein 2 isoform b SH3BP2 0.022 SH3-domain binding protein 2 isoform c LOC646862 0.022 PREDICTED: hypothetical protein LOC646862 LOC646862 0.022 PREDICTED: hypothetical protein LOC646862 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.