Guide to the Human Genome
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Name: DUS1L Sequence: fasta or formatted (473aa) NCBI GI: 40807366
Description:

PP3111 protein

Referenced in:

tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         43           2
 C cysteine            4.2         20           2
 D aspartate           3.6         17           1
 E glutamate           8.5         40           4
 F phenylalanine       3.2         15           1
 G glycine             6.8         32           2
 H histidine           3.4         16           2
 I isoleucine          3.0         14           1
 K lysine              7.4         35           2
 L leucine            10.6         50           2
 M methionine          1.7          8           1
 N asparagine          2.5         12           1
 P proline             6.3         30           1
 Q glutamine           5.9         28           1
 R arginine            6.6         31           2
 S serine              4.2         20           1
 T threonine           3.2         15           1
 V valine              6.1         29           2
 W tryptophan          1.7          8           1
 Y tyrosine            2.1         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PP3111 protein 
DUS4L                 0.141   dihydrouridine synthase 4-like 
DUS2L                 0.087   dihydrouridine synthase 2-like, SMM1 homolog 
DUS3L                 0.063   dihydrouridine synthase 3-like isoform 1 
DUS3L                 0.063   dihydrouridine synthase 3-like isoform 2 
ANK2                  0.013   ankyrin 2 isoform 1 
DPYD                  0.010   dihydropyrimidine dehydrogenase isoform 1 
USP35                 0.010   ubiquitin specific protease 35 
CCDC148               0.009   coiled-coil domain containing 148 
PRKD2                 0.007   protein kinase D2 isoform B 
PRKD2                 0.007   protein kinase D2 isoform A 
PRKD2                 0.007   protein kinase D2 isoform A 
PRKD2                 0.007   protein kinase D2 isoform A 
TMEM20                0.007   transmembrane protein 20 isoform 2 
RNF169                0.007   ring finger protein 169 
SH3BP5L               0.007   SH3-binding domain protein 5-like 
PHLDB1                0.007   pleckstrin homology-like domain, family B, member 1...
PHLDB1                0.007   pleckstrin homology-like domain, family B, member 1...
PHLDB1                0.007   pleckstrin homology-like domain, family B, member 1 ...
TMEM20                0.007   transmembrane protein 20 isoform 1 
ZNF808                0.006   zinc finger protein 808 
FAM161A               0.006   hypothetical protein LOC84140 
C4orf14               0.006   hypothetical protein LOC84273 
ZNF500                0.006   zinc finger protein 500 
LOC100289899          0.005   PREDICTED: hypothetical protein XP_002347041 
XAF1                  0.005   XIAP associated factor 1 isoform 2 
XAF1                  0.005   XIAP associated factor 1 isoform 1 
YOD1                  0.005   YOD1 OTU deubiquinating enzyme 1 homolog 
TCEA1                 0.005   transcription elongation factor A 1 isoform 1 
TCEA1                 0.005   transcription elongation factor A 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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