Guide to the Human Genome
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Name: DUS2L Sequence: fasta or formatted (493aa) NCBI GI: 8923374
Description:

dihydrouridine synthase 2-like, SMM1 homolog

Referenced in:

tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         45           3
 C cysteine            2.8         14           1
 D aspartate           5.1         25           2
 E glutamate           8.1         40           2
 F phenylalanine       2.0         10           1
 G glycine             5.7         28           2
 H histidine           1.6          8           1
 I isoleucine          5.3         26           1
 K lysine              5.7         28           2
 L leucine             9.9         49           2
 M methionine          2.6         13           1
 N asparagine          2.0         10           1
 P proline             5.3         26           1
 Q glutamine           5.7         28           2
 R arginine            7.3         36           2
 S serine              6.3         31           2
 T threonine           4.7         23           2
 V valine              7.1         35           2
 W tryptophan          0.8          4           1
 Y tyrosine            2.8         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dihydrouridine synthase 2-like, SMM1 homolog 
DUS4L                 0.098   dihydrouridine synthase 4-like 
DUS1L                 0.087   PP3111 protein 
DUS3L                 0.050   dihydrouridine synthase 3-like isoform 1 
DUS3L                 0.050   dihydrouridine synthase 3-like isoform 2 
LOC100293597          0.010   PREDICTED: similar to hCG2036697 
LOC100291435          0.010   PREDICTED: hypothetical protein XP_002347033 
LOC100287651          0.010   PREDICTED: hypothetical protein XP_002342894 
SNX26                 0.008   sorting nexin 26 
DST                   0.006   dystonin isoform 4 
DST                   0.006   dystonin isoform 3 
DST                   0.006   dystonin isoform 2 
DST                   0.006   dystonin isoform 1 
DST                   0.006   dystonin isoform 1eB precursor 
DST                   0.006   dystonin isoform 1eA precursor 
DST                   0.006   dystonin isoform 1e precursor 
SCN2A                 0.006   sodium channel, voltage-gated, type II, alpha isofor...
SCN2A                 0.006   sodium channel, voltage-gated, type II, alpha isofor...
SCN2A                 0.006   sodium channel, voltage-gated, type II, alpha isofor...
KIF4B                 0.005   kinesin family member 4B 
SDK1                  0.005   sidekick 1 
NOS1AP                0.005   nitric oxide synthase 1 (neuronal) adaptor protein i...
PLEC1                 0.005   plectin 1 isoform 11 
PLEC1                 0.005   plectin 1 isoform 10 
PLEC1                 0.005   plectin 1 isoform 8 
PLEC1                 0.005   plectin 1 isoform 7 
PLEC1                 0.005   plectin 1 isoform 6 
PLEC1                 0.005   plectin 1 isoform 3 
PLEC1                 0.005   plectin 1 isoform 2 
PLEC1                 0.005   plectin 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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