Guide to the Human Genome
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Name: DUS3L Sequence: fasta or formatted (650aa) NCBI GI: 239788462
Description:

dihydrouridine synthase 3-like isoform 1

Referenced in:

tRNA Enzymes

Other entries for this name:
alt prot [408aa] dihydrouridine synthase 3-like isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         54           3
 C cysteine            3.1         20           1
 D aspartate           4.5         29           1
 E glutamate           8.2         53           2
 F phenylalanine       3.7         24           2
 G glycine             8.9         58           4
 H histidine           1.5         10           1
 I isoleucine          3.2         21           1
 K lysine              4.8         31           2
 L leucine            10.2         66           2
 M methionine          1.7         11           1
 N asparagine          2.9         19           1
 P proline             6.5         42           2
 Q glutamine           5.8         38           3
 R arginine            8.8         57           2
 S serine              3.4         22           3
 T threonine           5.8         38           2
 V valine              5.4         35           2
 W tryptophan          1.2          8           1
 Y tyrosine            2.2         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dihydrouridine synthase 3-like isoform 1 
DUS3L                 0.534   dihydrouridine synthase 3-like isoform 2 
DUS1L                 0.046   PP3111 protein 
DUS4L                 0.040   dihydrouridine synthase 4-like 
DUS2L                 0.037   dihydrouridine synthase 2-like, SMM1 homolog 
ZFP36                 0.016   zinc finger protein 36, C3H type, homolog 
ZFP36L1               0.015   butyrate response factor 1 
ZFP36L2               0.015   zinc finger protein 36, C3H type-like 2 
CLIC6                 0.008   chloride intracellular channel 6 
CROCC                 0.008   ciliary rootlet coiled-coil 
SETD1A                0.006   SET domain containing 1A 
ZC3H8                 0.006   zinc finger CCCH-type containing 8 
UPF3A                 0.006   UPF3 regulator of nonsense transcripts homolog A iso...
UPF3A                 0.006   UPF3 regulator of nonsense transcripts homolog A iso...
EP400                 0.006   E1A binding protein p400 
FAM129B               0.005   hypothetical protein LOC64855 isoform 1 
FAM129B               0.005   hypothetical protein LOC64855 isoform 2 
LOC729575             0.005   PREDICTED: hypothetical protein 
LOC100288110          0.005   PREDICTED: hypothetical protein 
LOC100288110          0.005   PREDICTED: hypothetical protein XP_002343007 
SCAF1                 0.005   SR-related CTD-associated factor 1 
LZTS2                 0.005   leucine zipper, putative tumor suppressor 2 
SH3BGR                0.005   SH3-binding domain and glutamic acid-rich protein is...
UNK                   0.005   zinc finger CCCH-type domain containing 5 
SH3BGR                0.005   SH3-binding domain and glutamic acid-rich protein iso...
ZEB1                  0.005   zinc finger E-box binding homeobox 1 isoform a [Hom...
ZEB1                  0.005   zinc finger E-box binding homeobox 1 isoform b [Hom...
SPTBN2                0.005   spectrin, beta, non-erythrocytic 2 
AZI1                  0.005   5-azacytidine induced 1 isoform b 
AZI1                  0.005   5-azacytidine induced 1 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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