Guide to the Human Genome
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Name: SH3BP5L Sequence: fasta or formatted (393aa) NCBI GI: 24308303
Description:

SH3-binding domain protein 5-like

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         36           2
 C cysteine            1.0          4           1
 D aspartate           3.8         15           1
 E glutamate          13.2         52           4
 F phenylalanine       0.8          3           1
 G glycine             8.9         35           4
 H histidine           2.8         11           1
 I isoleucine          2.3          9           1
 K lysine              3.6         14           1
 L leucine             9.7         38           2
 M methionine          1.5          6           1
 N asparagine          2.0          8           1
 P proline             5.1         20           2
 Q glutamine           7.1         28           2
 R arginine           10.4         41           3
 S serine              7.6         30           4
 T threonine           3.8         15           2
 V valine              5.3         21           2
 W tryptophan          0.3          1           1
 Y tyrosine            1.5          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SH3-binding domain protein 5-like 
SH3BP5                0.248   SH3-domain binding protein 5 (BTK-associated) isofo...
SH3BP5                0.105   SH3-domain binding protein 5 (BTK-associated) isofo...
NUMA1                 0.033   nuclear mitotic apparatus protein 1 
PLEC1                 0.032   plectin 1 isoform 11 
PLEC1                 0.032   plectin 1 isoform 10 
PLEC1                 0.032   plectin 1 isoform 8 
PLEC1                 0.032   plectin 1 isoform 7 
PLEC1                 0.032   plectin 1 isoform 6 
PLEC1                 0.032   plectin 1 isoform 3 
PLEC1                 0.032   plectin 1 isoform 2 
PLEC1                 0.032   plectin 1 isoform 1 
MYH7B                 0.032   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
MYH7                  0.031   myosin, heavy chain 7, cardiac muscle, beta 
ZNF853                0.029   zinc finger protein 853 
LOC645202             0.029   PREDICTED: hypothetical protein LOC645202 
MAD1L1                0.029   MAD1-like 1 protein 
MAD1L1                0.029   MAD1-like 1 protein 
MAD1L1                0.029   MAD1-like 1 protein 
MYH6                  0.029   myosin heavy chain 6 
KIAA1211              0.029   hypothetical protein LOC57482 
LOC100130174          0.028   PREDICTED: hypothetical protein 
LOC100130174          0.028   PREDICTED: hypothetical protein 
LOC100130174          0.028   PREDICTED: hypothetical protein 
CEP250                0.027   centrosomal protein 2 
C6orf174              0.027   hypothetical protein LOC387104 
SMC1A                 0.027   structural maintenance of chromosomes 1A 
DEF6                  0.025   differentially expressed in FDCP 6 homolog 
MYH2                  0.025   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.025   myosin, heavy chain 2, skeletal muscle, adult [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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