CCDC148 25432

Name: CCDC148	Sequence: fasta or formatted (591aa)		NCBI GI: 31377611
Description: coiled-coil domain containing 148		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 35 2 C cysteine 1.7 10 1 D aspartate 4.6 27 1 E glutamate 11.8 70 3 F phenylalanine 2.9 17 1 G glycine 0.8 5 1 H histidine 2.7 16 2 I isoleucine 5.2 31 2 K lysine 11.7 69 4 L leucine 12.0 71 2 M methionine 3.0 18 2 N asparagine 3.6 21 1 P proline 2.9 17 2 Q glutamine 7.8 46 2 R arginine 7.1 42 3 S serine 5.1 30 2 T threonine 3.0 18 1 V valine 3.4 20 2 W tryptophan 1.5 9 2 Y tyrosine 3.2 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 148 LOC283685 0.048 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC645202 0.039 PREDICTED: hypothetical protein LOC645202 LOC100132816 0.037 PREDICTED: similar to Putative golgin subfamily A m... CCDC112 0.037 coiled-coil domain containing 112 isoform 1 CCDC112 0.037 coiled-coil domain containing 112 isoform 2 LOC400352 0.035 PREDICTED: similar to Putative golgin subfamily A m... LOC283685 0.035 PREDICTED: golgi autoantigen, golgin subfamily a-li... TCHH 0.035 trichohyalin EIF3A 0.035 eukaryotic translation initiation factor 3, subunit 1... LOC440243 0.034 PREDICTED: Putative golgin subfamily A member 6-lik... INCENP 0.034 inner centromere protein antigens 135/155kDa isofor... INCENP 0.034 inner centromere protein antigens 135/155kDa isofor... EEA1 0.033 early endosome antigen 1, 162kD CENPE 0.032 centromere protein E CCDC41 0.032 NY-REN-58 antigen CCDC41 0.032 NY-REN-58 antigen GCC2 0.032 GRIP and coiled-coil domain-containing 2 LOC727832 0.031 golgi autoantigen, golgin subfamily a-like LOC283767 0.031 golgi autoantigen, golgin subfamily a-like CLIP1 0.030 restin isoform b CLIP1 0.030 restin isoform a MYH11 0.030 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.030 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.030 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.030 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... GOLGA4 0.030 golgi autoantigen, golgin subfamily a, 4 WDR87 0.030 NYD-SP11 protein KTN1 0.030 kinectin 1 isoform a KTN1 0.030 kinectin 1 isoform c Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.