Guide to the Human Genome
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Name: XAF1 Sequence: fasta or formatted (282aa) NCBI GI: 40288193
Description:

XIAP associated factor 1 isoform 2

Referenced in:

Protease Inhibitors

Other entries for this name:
alt prot [301aa] XIAP associated factor 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3         12           2
 C cysteine            7.1         20           2
 D aspartate           2.8          8           1
 E glutamate           9.6         27           2
 F phenylalanine       3.5         10           1
 G glycine             3.9         11           1
 H histidine           4.6         13           2
 I isoleucine          3.2          9           1
 K lysine              7.8         22           2
 L leucine             8.5         24           2
 M methionine          3.2          9           1
 N asparagine          3.9         11           1
 P proline             7.1         20           1
 Q glutamine           5.7         16           2
 R arginine            7.1         20           2
 S serine              8.9         25           3
 T threonine           2.8          8           1
 V valine              3.5         10           2
 W tryptophan          0.4          1           1
 Y tyrosine            2.1          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   XIAP associated factor 1 isoform 2 
XAF1                  0.979   XIAP associated factor 1 isoform 1 
TRAFD1                0.137   TRAF-type zinc finger domain containing 1 
TRAFD1                0.137   TRAF-type zinc finger domain containing 1 
TRAF6                 0.047   TNF receptor-associated factor 6 
TRAF6                 0.047   TNF receptor-associated factor 6 
TRAF4                 0.042   TNF receptor-associated factor 4 
TRAF5                 0.038   TNF receptor-associated factor 5 
TRAF5                 0.038   TNF receptor-associated factor 5 
TRAF5                 0.038   TNF receptor-associated factor 5 
TRAF2                 0.035   TNF receptor-associated factor 2 
ZBTB48                0.035   zinc finger and BTB domain containing 48 
ZNF91                 0.031   zinc finger protein 91 
ZNF433                0.031   zinc finger protein 433 
ZNF583                0.030   zinc finger protein 583 
ZNF583                0.030   zinc finger protein 583 
ZNF583                0.030   zinc finger protein 583 
ZNF548                0.028   zinc finger protein 548 
ZNF398                0.026   zinc finger 398 isoform b 
ZNF398                0.026   zinc finger 398 isoform a 
ZNF565                0.026   zinc finger protein 565 
ZNF565                0.026   zinc finger protein 565 
ZNF286B               0.026   zinc finger protein 286B 
ZBTB38                0.026   zinc finger and BTB domain containing 38 
ZNF766                0.026   zinc finger protein 766 
ZNF286A               0.024   zinc finger protein 286 
ZNF286A               0.024   zinc finger protein 286 
ZNF154                0.024   zinc finger protein 154 
ZNF749                0.024   zinc finger protein 749 
LOC647678             0.024   PREDICTED: similar to zinc finger protein 347 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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