Guide to the Human Genome
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Name: FAM161A Sequence: fasta or formatted (660aa) NCBI GI: 187936946
Description:

hypothetical protein LOC84140

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         45           3
 C cysteine            1.8         12           1
 D aspartate           4.2         28           1
 E glutamate          13.6         90           4
 F phenylalanine       3.2         21           1
 G glycine             2.0         13           1
 H histidine           2.7         18           2
 I isoleucine          2.9         19           1
 K lysine             11.4         75           3
 L leucine             7.3         48           2
 M methionine          2.0         13           2
 N asparagine          4.2         28           2
 P proline             6.1         40           2
 Q glutamine           3.6         24           1
 R arginine            7.1         47           3
 S serine              8.5         56           3
 T threonine           3.6         24           2
 V valine              5.3         35           2
 W tryptophan          0.5          3           1
 Y tyrosine            3.2         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC84140 
FAM161B               0.118   hypothetical protein LOC145483 
LOC283685             0.023   PREDICTED: golgi autoantigen, golgin subfamily a-li...
TCHH                  0.023   trichohyalin 
TSGA10IP              0.023   testis specific, 10 interacting protein 
THOC2                 0.021   THO complex 2 
KIF20B                0.020   M-phase phosphoprotein 1 
UBTF                  0.018   upstream binding transcription factor, RNA polymerase...
LOC727832             0.018   golgi autoantigen, golgin subfamily a-like 
LOC440243             0.017   PREDICTED: Putative golgin subfamily A member 6-lik...
LOC283767             0.016   golgi autoantigen, golgin subfamily a-like 
LOC645202             0.016   PREDICTED: hypothetical protein LOC645202 
GCC2                  0.016   GRIP and coiled-coil domain-containing 2 
LOC283685             0.016   PREDICTED: golgi autoantigen, golgin subfamily a-li...
UBTF                  0.016   upstream binding transcription factor, RNA polymera...
UBTF                  0.016   upstream binding transcription factor, RNA polymera...
MAP9                  0.015   aster-associated protein 
CDC2L2                0.015   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.015   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.015   cell division cycle 2-like 1 (PITSLRE proteins) isof...
DICER1                0.015   dicer1 
DICER1                0.015   dicer1 
EIF5B                 0.015   eukaryotic translation initiation factor 5B 
MYST4                 0.015   MYST histone acetyltransferase (monocytic leukemia)...
C2orf77               0.015   hypothetical protein LOC129881 
ERC1                  0.015   RAB6-interacting protein 2 isoform epsilon 
ERC1                  0.015   RAB6-interacting protein 2 isoform delta 
WDR87                 0.015   NYD-SP11 protein 
CDC2L1                0.015   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.015   cell division cycle 2-like 1 (PITSLRE proteins) isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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