CACNB1 27557

Name: CACNB1	Sequence: fasta or formatted (523aa)		NCBI GI: 40804470
Description: calcium channel, voltage-dependent, beta 1 subunit isoform 2		Referenced in: Calcium and TRP Cation Channels
Other entries for this name: alt prot [598aa] calcium channel, voltage-dependent, beta 1 subunit isoform 1 alt prot [478aa] calcium channel, voltage-dependent, beta 1 subunit isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.9 36 2 C cysteine 0.6 3 1 D aspartate 4.4 23 1 E glutamate 7.8 41 4 F phenylalanine 3.1 16 2 G glycine 5.2 27 2 H histidine 1.9 10 1 I isoleucine 4.8 25 3 K lysine 6.3 33 2 L leucine 9.0 47 2 M methionine 1.9 10 2 N asparagine 3.6 19 2 P proline 7.8 41 3 Q glutamine 4.8 25 1 R arginine 6.1 32 2 S serine 11.1 58 4 T threonine 5.5 29 2 V valine 6.5 34 2 W tryptophan 0.8 4 2 Y tyrosine 1.9 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calcium channel, voltage-dependent, beta 1 subunit i... CACNB1 0.871 calcium channel, voltage-dependent, beta 1 subunit i... CACNB1 0.805 calcium channel, voltage-dependent, beta 1 subunit i... CACNB2 0.682 calcium channel, voltage-dependent, beta 2 subunit ... CACNB2 0.681 calcium channel, voltage-dependent, beta 2 subunit ... CACNB2 0.640 calcium channel, voltage-dependent, beta 2 subunit i... CACNB2 0.638 calcium channel, voltage-dependent, beta 2 subunit ... CACNB2 0.637 calcium channel, voltage-dependent, beta 2 subunit ... CACNB2 0.636 calcium channel, voltage-dependent, beta 2 subunit i... CACNB2 0.636 calcium channel, voltage-dependent, beta 2 subunit ... CACNB2 0.631 calcium channel, voltage-dependent, beta 2 subunit ... CACNB4 0.567 calcium channel, voltage-dependent, beta 4 subunit i... CACNB4 0.565 calcium channel, voltage-dependent, beta 4 subunit i... CACNB4 0.545 calcium channel, voltage-dependent, beta 4 subunit i... CACNB4 0.479 calcium channel, voltage-dependent, beta 4 subunit ... CACNB3 0.447 calcium channel, voltage-dependent, beta 3 subunit [... DLG1 0.021 discs, large homolog 1 isoform 2 DLG3 0.021 synapse-associated protein 102 isoform b MPP6 0.015 membrane protein, palmitoylated 6 CASK 0.015 calcium/calmodulin-dependent serine protein kinase ... CASK 0.015 calcium/calmodulin-dependent serine protein kinase ... CASK 0.015 calcium/calmodulin-dependent serine protein kinase ... DLG1 0.014 discs, large homolog 1 isoform 1 MPP1 0.013 palmitoylated membrane protein 1 MPP5 0.013 membrane protein, palmitoylated 5 DLG3 0.012 synapse-associated protein 102 isoform a FLG 0.011 filaggrin DLG2 0.011 chapsyn-110 isoform 3 DLG2 0.011 chapsyn-110 isoform 4 DLG2 0.009 chapsyn-110 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.