CACNB1 27558

Name: CACNB1	Sequence: fasta or formatted (478aa)		NCBI GI: 40804472
Description: calcium channel, voltage-dependent, beta 1 subunit isoform 3		Referenced in: Calcium and TRP Cation Channels
Other entries for this name: alt prot [598aa] calcium channel, voltage-dependent, beta 1 subunit isoform 1 alt prot [523aa] calcium channel, voltage-dependent, beta 1 subunit isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 34 2 C cysteine 0.6 3 1 D aspartate 4.6 22 1 E glutamate 6.7 32 2 F phenylalanine 2.7 13 1 G glycine 4.8 23 2 H histidine 1.9 9 1 I isoleucine 5.0 24 3 K lysine 6.7 32 1 L leucine 8.8 42 2 M methionine 1.9 9 2 N asparagine 3.6 17 2 P proline 7.5 36 2 Q glutamine 5.4 26 1 R arginine 6.5 31 2 S serine 11.3 54 4 T threonine 5.2 25 2 V valine 6.7 32 2 W tryptophan 0.8 4 2 Y tyrosine 2.1 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calcium channel, voltage-dependent, beta 1 subunit i... CACNB1 0.964 calcium channel, voltage-dependent, beta 1 subunit i... CACNB1 0.928 calcium channel, voltage-dependent, beta 1 subunit i... CACNB2 0.734 calcium channel, voltage-dependent, beta 2 subunit ... CACNB2 0.709 calcium channel, voltage-dependent, beta 2 subunit i... CACNB2 0.708 calcium channel, voltage-dependent, beta 2 subunit ... CACNB2 0.704 calcium channel, voltage-dependent, beta 2 subunit ... CACNB2 0.702 calcium channel, voltage-dependent, beta 2 subunit ... CACNB4 0.656 calcium channel, voltage-dependent, beta 4 subunit i... CACNB4 0.654 calcium channel, voltage-dependent, beta 4 subunit i... CACNB2 0.653 calcium channel, voltage-dependent, beta 2 subunit ... CACNB2 0.653 calcium channel, voltage-dependent, beta 2 subunit i... CACNB2 0.653 calcium channel, voltage-dependent, beta 2 subunit ... CACNB4 0.632 calcium channel, voltage-dependent, beta 4 subunit i... CACNB4 0.559 calcium channel, voltage-dependent, beta 4 subunit ... CACNB3 0.554 calcium channel, voltage-dependent, beta 3 subunit [... DLG1 0.028 discs, large homolog 1 isoform 1 DLG3 0.026 synapse-associated protein 102 isoform a DLG3 0.024 synapse-associated protein 102 isoform b MPP5 0.024 membrane protein, palmitoylated 5 MPP6 0.024 membrane protein, palmitoylated 6 DLG1 0.021 discs, large homolog 1 isoform 2 DLG2 0.020 chapsyn-110 isoform 3 DLG2 0.020 chapsyn-110 isoform 4 DLG4 0.017 post-synaptic density protein 95 isoform 1 DLG4 0.017 post-synaptic density protein 95 isoform 2 CASK 0.016 calcium/calmodulin-dependent serine protein kinase ... CASK 0.016 calcium/calmodulin-dependent serine protein kinase ... CASK 0.016 calcium/calmodulin-dependent serine protein kinase ... DLG2 0.015 chapsyn-110 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.