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Name: CACNB2 Sequence: fasta or formatted (660aa) NCBI GI: 147898681
Description:

calcium channel, voltage-dependent, beta 2 subunit isoform 2

Referenced in:

Calcium and TRP Cation Channels

Other entries for this name:
alt prot [622aa] calcium channel, voltage-dependent, beta 2 subunit isoform 5
alt prot [608aa] calcium channel, voltage-dependent, beta 2 subunit isoform 8
alt prot [632aa] calcium channel, voltage-dependent, beta 2 subunit isoform 6
alt prot [606aa] calcium channel, voltage-dependent, beta 2 subunit isoform 3
alt prot [605aa] calcium channel, voltage-dependent, beta 2 subunit isoform 1
alt prot [612aa] calcium channel, voltage-dependent, beta 2 subunit isoform 7
alt prot [636aa] calcium channel, voltage-dependent, beta 2 subunit isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         56           4
 C cysteine            0.8          5           1
 D aspartate           6.5         43           2
 E glutamate           7.4         49           3
 F phenylalanine       2.4         16           2
 G glycine             4.1         27           2
 H histidine           4.2         28           2
 I isoleucine          3.8         25           2
 K lysine              6.5         43           2
 L leucine             6.2         41           2
 M methionine          1.5         10           2
 N asparagine          3.8         25           2
 P proline             5.9         39           2
 Q glutamine           4.5         30           1
 R arginine            7.7         51           2
 S serine             13.0         86           4
 T threonine           4.2         28           2
 V valine              6.1         40           2
 W tryptophan          0.6          4           2
 Y tyrosine            2.1         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   calcium channel, voltage-dependent, beta 2 subunit ... 
CACNB2                0.943   calcium channel, voltage-dependent, beta 2 subunit ...
CACNB2                0.918   calcium channel, voltage-dependent, beta 2 subunit ...
CACNB2                0.917   calcium channel, voltage-dependent, beta 2 subunit i...
CACNB2                0.896   calcium channel, voltage-dependent, beta 2 subunit ...
CACNB2                0.896   calcium channel, voltage-dependent, beta 2 subunit i...
CACNB2                0.896   calcium channel, voltage-dependent, beta 2 subunit ...
CACNB2                0.860   calcium channel, voltage-dependent, beta 2 subunit ...
CACNB1                0.546   calcium channel, voltage-dependent, beta 1 subunit i...
CACNB1                0.533   calcium channel, voltage-dependent, beta 1 subunit i...
CACNB1                0.502   calcium channel, voltage-dependent, beta 1 subunit i...
CACNB4                0.470   calcium channel, voltage-dependent, beta 4 subunit i...
CACNB4                0.470   calcium channel, voltage-dependent, beta 4 subunit i...
CACNB4                0.457   calcium channel, voltage-dependent, beta 4 subunit i...
CACNB4                0.395   calcium channel, voltage-dependent, beta 4 subunit ...
CACNB3                0.394   calcium channel, voltage-dependent, beta 3 subunit [...
GPATCH8               0.026   G patch domain containing 8 
DLG3                  0.023   synapse-associated protein 102 isoform b 
DLG1                  0.021   discs, large homolog 1 isoform 2 
HRC                   0.019   histidine rich calcium binding protein precursor [Hom...
SRRM2                 0.019   splicing coactivator subunit SRm300 
CCNL1                 0.018   cyclin L1 
RSRC2                 0.017   arginine/serine-rich coiled-coil 2 isoform a 
PRPF38B               0.016   PRP38 pre-mRNA processing factor 38 (yeast) domain ...
CCDC55                0.016   coiled-coil domain containing 55 isoform 1 
SFRS8                 0.016   splicing factor, arginine/serine-rich 8 
LOC100170229          0.015   hypothetical protein LOC100170229 
LOC100286959          0.014   PREDICTED: hypothetical protein XP_002343921 
RNASEN                0.014   ribonuclease III, nuclear isoform 2 
RNASEN                0.014   ribonuclease III, nuclear isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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