CACNB1 27556

Name: CACNB1	Sequence: fasta or formatted (598aa)		NCBI GI: 40804468
Description: calcium channel, voltage-dependent, beta 1 subunit isoform 1		Referenced in: Calcium and TRP Cation Channels
Other entries for this name: alt prot [523aa] calcium channel, voltage-dependent, beta 1 subunit isoform 2 alt prot [478aa] calcium channel, voltage-dependent, beta 1 subunit isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 44 2 C cysteine 0.8 5 1 D aspartate 5.5 33 1 E glutamate 7.7 46 3 F phenylalanine 2.2 13 1 G glycine 7.4 44 3 H histidine 1.8 11 1 I isoleucine 4.2 25 3 K lysine 5.7 34 1 L leucine 8.2 49 2 M methionine 1.7 10 2 N asparagine 3.7 22 2 P proline 8.4 50 2 Q glutamine 4.3 26 1 R arginine 6.9 41 2 S serine 10.0 60 4 T threonine 5.4 32 2 V valine 5.2 31 2 W tryptophan 0.8 5 2 Y tyrosine 2.8 17 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calcium channel, voltage-dependent, beta 1 subunit i... CACNB1 0.723 calcium channel, voltage-dependent, beta 1 subunit i... CACNB1 0.695 calcium channel, voltage-dependent, beta 1 subunit i... CACNB2 0.620 calcium channel, voltage-dependent, beta 2 subunit ... CACNB2 0.601 calcium channel, voltage-dependent, beta 2 subunit i... CACNB2 0.600 calcium channel, voltage-dependent, beta 2 subunit ... CACNB2 0.597 calcium channel, voltage-dependent, beta 2 subunit ... CACNB2 0.596 calcium channel, voltage-dependent, beta 2 subunit ... CACNB2 0.557 calcium channel, voltage-dependent, beta 2 subunit ... CACNB2 0.557 calcium channel, voltage-dependent, beta 2 subunit i... CACNB2 0.557 calcium channel, voltage-dependent, beta 2 subunit ... CACNB4 0.513 calcium channel, voltage-dependent, beta 4 subunit i... CACNB4 0.511 calcium channel, voltage-dependent, beta 4 subunit i... CACNB4 0.494 calcium channel, voltage-dependent, beta 4 subunit i... CACNB4 0.436 calcium channel, voltage-dependent, beta 4 subunit ... CACNB3 0.431 calcium channel, voltage-dependent, beta 3 subunit [... DLG1 0.022 discs, large homolog 1 isoform 1 DLG3 0.020 synapse-associated protein 102 isoform a DLG3 0.019 synapse-associated protein 102 isoform b MPP5 0.019 membrane protein, palmitoylated 5 MPP6 0.019 membrane protein, palmitoylated 6 DLG1 0.016 discs, large homolog 1 isoform 2 DLG2 0.015 chapsyn-110 isoform 3 DLG2 0.015 chapsyn-110 isoform 4 DLG4 0.014 post-synaptic density protein 95 isoform 1 DLG4 0.014 post-synaptic density protein 95 isoform 2 CASK 0.013 calcium/calmodulin-dependent serine protein kinase ... CASK 0.013 calcium/calmodulin-dependent serine protein kinase ... CASK 0.013 calcium/calmodulin-dependent serine protein kinase ... KIF13B 0.013 kinesin family member 13B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.