RNPC3 27490

Name: RNPC3	Sequence: fasta or formatted (517aa)		NCBI GI: 40538732
Description: RNA-binding region (RNP1, RRM) containing 3		Referenced in: Capping and Splicing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 32 3 C cysteine 1.5 8 1 D aspartate 5.4 28 2 E glutamate 9.5 49 2 F phenylalanine 3.7 19 1 G glycine 4.3 22 1 H histidine 2.7 14 1 I isoleucine 4.1 21 1 K lysine 9.3 48 3 L leucine 9.5 49 2 M methionine 3.1 16 1 N asparagine 3.9 20 1 P proline 9.5 49 3 Q glutamine 3.3 17 1 R arginine 5.8 30 2 S serine 7.0 36 4 T threonine 4.3 22 1 V valine 4.6 24 2 W tryptophan 0.0 0 0 Y tyrosine 2.5 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RNA-binding region (RNP1, RRM) containing 3 RBM41 0.069 RNA binding motif protein 41 SNRPA 0.024 small nuclear ribonucleoprotein polypeptide A PABPC3 0.023 poly(A) binding protein, cytoplasmic 3 SNRPB2 0.023 small nuclear ribonucleoprotein polypeptide B'' [Hom... SNRPB2 0.023 small nuclear ribonucleoprotein polypeptide B'' [Homo... PABPC1 0.022 poly(A) binding protein, cytoplasmic 1 TRA2B 0.020 splicing factor, arginine/serine-rich 10 PABPC1L 0.019 poly(A)-binding protein, cytoplasmic 1-like PABPC4 0.019 poly A binding protein, cytoplasmic 4 isoform 3 [Ho... PABPC4 0.019 poly A binding protein, cytoplasmic 4 isoform 2 [Homo... PABPC4 0.019 poly A binding protein, cytoplasmic 4 isoform 1 [Ho... PABPC4L 0.019 poly(A) binding protein, cytoplasmic 4-like RBM39 0.018 RNA binding motif protein 39 isoform b RBM39 0.018 RNA binding motif protein 39 isoform a RALYL 0.018 RALY RNA binding protein-like isoform 1 PSPC1 0.017 paraspeckle protein 1 SNRNP35 0.017 small nuclear ribonucleoprotein 35kDa (U11/U12) isof... SNRNP35 0.017 small nuclear ribonucleoprotein 35kDa (U11/U12) isof... SNRNP35 0.017 small nuclear ribonucleoprotein 35kDa (U11/U12) isof... PABPC5 0.016 poly(A) binding protein, cytoplasmic 5 RBM23 0.015 RNA binding motif protein 23 isoform 3 RBM23 0.015 RNA binding motif protein 23 isoform 1 RBM23 0.015 RNA binding motif protein 23 isoform 2 SFRS6 0.015 arginine/serine-rich splicing factor 6 RAVER2 0.015 ribonucleoprotein, PTB-binding 2 TRA2A 0.015 transformer-2 alpha FNBP4 0.015 formin binding protein 4 MYST4 0.015 MYST histone acetyltransferase (monocytic leukemia)... HNRNPM 0.014 heterogeneous nuclear ribonucleoprotein M isoform a ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.