SNRPA 30828

Name: SNRPA	Sequence: fasta or formatted (282aa)		NCBI GI: 4759156
Description: small nuclear ribonucleoprotein polypeptide A		Referenced in: Capping and Splicing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 22 2 C cysteine 0.0 0 0 D aspartate 3.2 9 1 E glutamate 5.0 14 2 F phenylalanine 5.3 15 1 G glycine 7.1 20 3 H histidine 1.8 5 2 I isoleucine 6.0 17 2 K lysine 7.8 22 2 L leucine 6.4 18 1 M methionine 6.0 17 1 N asparagine 4.6 13 2 P proline 12.4 35 3 Q glutamine 6.7 19 2 R arginine 4.6 13 1 S serine 4.3 12 2 T threonine 4.3 12 1 V valine 5.0 14 2 W tryptophan 0.0 0 0 Y tyrosine 1.8 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 small nuclear ribonucleoprotein polypeptide A SNRPB2 0.486 small nuclear ribonucleoprotein polypeptide B'' [Hom... SNRPB2 0.486 small nuclear ribonucleoprotein polypeptide B'' [Homo... SF3B4 0.078 splicing factor 3b, subunit 4 SFRS15 0.056 splicing factor, arginine/serine-rich 15 isoform 3 ... SFRS15 0.056 splicing factor, arginine/serine-rich 15 isoform 2 ... SFRS15 0.056 splicing factor, arginine/serine-rich 15 isoform 1 [... FMNL2 0.049 formin-like 2 TNRC4 0.047 trinucleotide repeat containing 4 WBP11 0.046 WW domain binding protein 11 RNPC3 0.046 RNA-binding region (RNP1, RRM) containing 3 FMN1 0.046 formin 1 SNRPN 0.046 small nuclear ribonucleoprotein polypeptide N SNRPN 0.046 small nuclear ribonucleoprotein polypeptide N SNRPN 0.046 small nuclear ribonucleoprotein polypeptide N SNRPN 0.046 small nuclear ribonucleoprotein polypeptide N SNRPN 0.046 small nuclear ribonucleoprotein polypeptide N ZNF207 0.046 zinc finger protein 207 isoform a SMARCC1 0.044 SWI/SNF-related matrix-associated actin-dependent r... SNRPB 0.044 small nuclear ribonucleoprotein polypeptide B/B' iso... DVL2 0.044 dishevelled 2 MLL4 0.044 myeloid/lymphoid or mixed-lineage leukemia 4 YLPM1 0.044 YLP motif containing 1 RBM26 0.042 RNA binding motif protein 26 PRPF40B 0.042 Huntingtin interacting protein C isoform 1 PTBP1 0.042 polypyrimidine tract-binding protein 1 isoform b [Ho... SF3B14 0.040 splicing factor 3B, 14 kDa subunit PRPF40B 0.040 Huntingtin interacting protein C isoform 2 PDCD6IP 0.040 programmed cell death 6 interacting protein isoform... PDCD6IP 0.040 programmed cell death 6 interacting protein isoform ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.