SNRNP35 2943

Name: SNRNP35	Sequence: fasta or formatted (246aa)		NCBI GI: 13027642
Description: small nuclear ribonucleoprotein 35kDa (U11/U12) isoform a		Referenced in: Capping and Splicing
Other entries for this name: alt prot [251aa] small nuclear ribonucleoprotein 35kDa (U11/U12) isoform b alt prot [251aa] small nuclear ribonucleoprotein 35kDa (U11/U12) isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.1 10 1 C cysteine 0.0 0 0 D aspartate 10.2 25 2 E glutamate 8.9 22 2 F phenylalanine 3.3 8 1 G glycine 8.5 21 3 H histidine 1.6 4 1 I isoleucine 4.5 11 1 K lysine 8.1 20 2 L leucine 7.7 19 2 M methionine 1.2 3 1 N asparagine 2.4 6 1 P proline 4.5 11 1 Q glutamine 1.6 4 1 R arginine 16.3 40 2 S serine 2.8 7 1 T threonine 2.8 7 1 V valine 5.3 13 2 W tryptophan 2.8 7 1 Y tyrosine 3.3 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 small nuclear ribonucleoprotein 35kDa (U11/U12) isof... SNRNP35 1.000 small nuclear ribonucleoprotein 35kDa (U11/U12) isof... SNRNP35 1.000 small nuclear ribonucleoprotein 35kDa (U11/U12) isof... SNRNP70 0.258 U1 small nuclear ribonucleoprotein 70 kDa PPIL4 0.102 peptidylprolyl isomerase-like 4 SFRS2 0.084 splicing factor, arginine/serine-rich 2 TRA2A 0.076 transformer-2 alpha RBMXL3 0.072 RNA binding motif protein, X-linked-like 3 SFRS2B 0.070 splicing factor, arginine/serine-rich 2B CSTF2T 0.059 cleavage stimulation factor, 3' pre-RNA, subunit 2, ... RBM19 0.059 RNA binding motif protein 19 RBM19 0.059 RNA binding motif protein 19 RBM19 0.059 RNA binding motif protein 19 CSTF2 0.059 cleavage stimulation factor subunit 2 NCL 0.059 nucleolin U2AF2 0.057 U2 (RNU2) small nuclear RNA auxiliary factor 2 isofo... U2AF2 0.057 U2 (RNU2) small nuclear RNA auxiliary factor 2 isofor... RBMX2 0.057 RNA binding motif protein, X-linked 2 ELAVL3 0.055 ELAV-like protein 3 isoform 1 ELAVL3 0.055 ELAV-like protein 3 isoform 2 RBMXL1 0.055 RNA binding motif protein, X-linked-like 1 RBMXL1 0.055 RNA binding motif protein, X-linked-like 1 LOC100288788 0.053 PREDICTED: similar to RNA binding motif protein, X-... LOC100288788 0.053 PREDICTED: hypothetical protein XP_002343863 TRA2B 0.053 splicing factor, arginine/serine-rich 10 RBMX 0.053 RNA binding motif protein, X-linked ZC3H18 0.053 zinc finger CCCH-type containing 18 RBM39 0.051 RNA binding motif protein 39 isoform b RBM39 0.051 RNA binding motif protein 39 isoform a RBM3 0.051 RNA binding motif protein 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.